WormBase Tree Display for Gene: WBGene00013794
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| WBGene00013794 | SMap | S_parent | Sequence | Y116A8C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dct-13 | Paper_evidence | WBPaper00031095 | |||||
| Person_evidence | WBPerson1157 | ||||||||
| Sequence_name | Y116A8C.17 | ||||||||
| Molecular_name | Y116A8C.17 | ||||||||
| Y116A8C.17.1 | |||||||||
| CE23326 | |||||||||
| Other_name | CELE_Y116A8C.17 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dct-13 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Nov 2007 16:33:50 | WBPerson2970 | Name_change | CGC_name | dct-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dct | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00037254 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099655 | ||||||||
| 00099656 | |||||||||
| 00099657 | |||||||||
| 00120565 | |||||||||
| 00120566 | |||||||||
| Ortholog (53) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | Y116A8C.17 encodes a CCCH tandem zinc finger (TZF) protein; based upon its sequence similarity to other TZF proteins, such as MEX-5 and POS-1, the product of Y116A8C.17 is predicted to function as an RNA-binding protein. | Paper_evidence | WBPaper00029068 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 18 Sep 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be located in cytosol. Expressed in head muscle; head neurons; intestine; pharyngeal neurons; and somatic nervous system. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12862) | ||||
| EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1108) | ||||||
| Molecular_info | Corresponding_CDS | Y116A8C.17 | |||||||
| Corresponding_transcript | Y116A8C.17.1 | ||||||||
| Other_sequence | MIC07882_1 | ||||||||
| MI08409 | |||||||||
| Associated_feature | WBsf652411 | ||||||||
| WBsf978860 | |||||||||
| Transcription_factor | WBTranscriptionFactor001086 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00085035 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062418 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055433 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019917 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7706 | ||||||||
| Expr1015990 | |||||||||
| Expr1036174 | |||||||||
| Expr1158946 | |||||||||
| Expr2010812 | |||||||||
| Expr2029049 | |||||||||
| Drives_construct | WBCnstr00012851 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (178) | |||||||||
| Map_info | Map | IV | Position | 15.9748 | Error | 0.010392 | |||
| Positive | Positive_clone | Y116A8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031095 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
