WormBase Tree Display for Gene: WBGene00013797
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| WBGene00013797 | SMap | S_parent | Sequence | Y116A8C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y116A8C.20 | |||||||
| Molecular_name | Y116A8C.20 | ||||||||
| Y116A8C.20.1 | |||||||||
| CE23329 | |||||||||
| Other_name | CELE_Y116A8C.20 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y116A8C.20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| Strain | WBStrain00037061 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099640 | ||||||||
| 00099641 | |||||||||
| 00099642 | |||||||||
| 00120573 | |||||||||
| 00120574 | |||||||||
| Ortholog (53) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | Y116A8C.20 encodes a CCCH tandem zinc finger (TZF) protein; based upon its sequence similarity to C. elegans POS-1, the product of Y116A8C.20 is predicted to function as an RNA-binding protein. | Paper_evidence | WBPaper00029068 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 18 Sep 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be located in cytosol. Expressed in dorsal nerve cord and ventral nerve cord. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12862) | ||||
| EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1108) | ||||||
| Molecular_info | Corresponding_CDS | Y116A8C.20 | |||||||
| Corresponding_transcript | Y116A8C.20.1 | ||||||||
| Associated_feature | WBsf655005 | ||||||||
| WBsf978592 | |||||||||
| Transcription_factor | WBTranscriptionFactor001088 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036604 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055437 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019920 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7708 | ||||||||
| Expr1036176 | |||||||||
| Expr1158949 | |||||||||
| Expr2007044 | |||||||||
| Expr2025271 | |||||||||
| Drives_construct | WBCnstr00012853 | ||||||||
| WBCnstr00029522 | |||||||||
| Construct_product | WBCnstr00021819 | ||||||||
| WBCnstr00021923 | |||||||||
| WBCnstr00029522 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (142) | |||||||||
| Map_info | Positive | Positive_clone | Y116A8C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 16.0589 | |||||||
| Reference | WBPaper00031095 | ||||||||
| Method | Gene |
