WormBase Tree Display for Gene: WBGene00013798
expand all nodes | collapse all nodes | view schema
| WBGene00013798 | SMap | S_parent | Sequence | Y116A8C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-195 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y116A8C.21 | ||||||||
| Molecular_name | Y116A8C.21 | ||||||||
| Y116A8C.21.1 | |||||||||
| CE43154 | |||||||||
| Other_name | CELE_Y116A8C.21 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-195 | ||||||||
| DB_info | Database | AceView | gene | 4R986 | |||||
| WormQTL | gene | WBGene00013798 | |||||||
| WormFlux | gene | WBGene00013798 | |||||||
| NDB | locus_tag | CELE_Y116A8C.21 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013798|UniProtKB=Q9U2V0 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 191002 | |||||||
| RefSeq | protein | NM_070620.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322199 | |||||||
| TrEMBL | UniProtAcc | Q9U2V0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2V0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-195 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (117) | |||||||||
| Structured_description | Automated_description | Is affected by rsr-2; drh-3; and eat-2 based on tiling array and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y116A8C.21 | |||||||
| Corresponding_CDS_history | Y116A8C.21:wp196 | ||||||||
| Corresponding_transcript | Y116A8C.21.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00055438 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019921 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025860 | ||||||||
| Expr1158950 | |||||||||
| Microarray_results | SMD_Y116A8C.21 | ||||||||
| 186561_at | |||||||||
| Aff_Y116A8A.E | |||||||||
| GPL14144_Y116A8C.21_806-865_0.958_1_A | |||||||||
| GPL19516_CGZ0042689 | |||||||||
| GPL21109_Y116A8C.21 | |||||||||
| GPL3518_CE23330 | |||||||||
| GPL8673_Y116A8C_21P00173 | |||||||||
| GPL8673_Y116A8C_21P00453 | |||||||||
| GPL8673_Y116A8C_21P00726 | |||||||||
| Expression_cluster (30) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | IV | Position | 16.0699 | Error | 0.005717 | |||
| Positive | Positive_clone | Y116A8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
