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WormBase Tree Display for Gene: WBGene00013931

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Name Class

WBGene00013931SMapS_parentSequenceZK39
IdentityVersion2
NameCGC_nameclec-97Person_evidenceWBPerson2531
Sequence_nameZK39.6
Molecular_nameZK39.6
ZK39.6.1
CE19317
Other_nameCELE_ZK39.6Accession_evidenceNDBBX284601
Public_nameclec-97
DB_infoDatabaseAceViewgene1L745
WormQTLgeneWBGene00013931
WormFluxgeneWBGene00013931
NDBlocus_tagCELE_ZK39.6
PanthergeneCAEEL|WormBase=WBGene00013931|UniProtKB=Q9XUI4
familyPTHR23124
NCBIgene191214
RefSeqproteinNM_060469.7
TREEFAMTREEFAM_IDTF315870
TrEMBLUniProtAccQ9XUI4
UniProt_GCRPUniProtAccQ9XUI4
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-97
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (45)
RNASeq_FPKM (74)
Ortholog (14)
Paralog (126)
Structured_descriptionAutomated_descriptionEnriched in NSM based on tiling array studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including D-glucose; bisphenol S; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK39.6
Corresponding_CDS_historyZK39.6:wp63
ZK39.6:wp114
Corresponding_transcriptZK39.6.1
Associated_featureWBsf985212
WBsf985213
WBsf1010666
WBsf1010667
WBsf218516
WBsf218517
Experimental_infoRNAi_resultWBRNAi00038286Inferred_automaticallyRNAi_primary
WBRNAi00024186Inferred_automaticallyRNAi_primary
WBRNAi00023386Inferred_automaticallyRNAi_primary
WBRNAi00024272Inferred_automaticallyRNAi_primary
WBRNAi00004934Inferred_automaticallyRNAi_primary
WBRNAi00023901Inferred_automaticallyRNAi_primary
WBRNAi00059404Inferred_automaticallyRNAi_primary
WBRNAi00004933Inferred_automaticallyRNAi_primary
Expr_patternExpr1028404
Expr1162832
Expr2010225
Drives_constructWBCnstr00029434
Construct_productWBCnstr00029434
Microarray_results (19)
Expression_cluster (178)
Interaction (74)
Map_infoMapIPosition6.98487Error0.031012
PositivePositive_cloneZK39Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00032258
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene