WormBase Tree Display for Gene: WBGene00013933
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| WBGene00013933 | SMap | S_parent | Sequence | ZK39 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-99 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | ZK39.8 | ||||||||
| Molecular_name | ZK39.8 | ||||||||
| ZK39.8.1 | |||||||||
| CE19319 | |||||||||
| Other_name | CELE_ZK39.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-99 | ||||||||
| DB_info | Database | AceView | gene | 1L750 | |||||
| WormQTL | gene | WBGene00013933 | |||||||
| WormFlux | gene | WBGene00013933 | |||||||
| NDB | locus_tag | CELE_ZK39.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013933|UniProtKB=Q9XUH9 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 173011 | |||||||
| RefSeq | protein | NM_060471.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9XUH9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUH9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-99 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in NSM; RME; amphid sheath cell; germ line; and in male based on proteomic; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and rrf-3 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including Alovudine; stavudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK39.8 | |||||||
| Corresponding_transcript | ZK39.8.1 | ||||||||
| Other_sequence | CBC17465_1 | ||||||||
| Associated_feature | WBsf220312 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00112640 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022520 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059406 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038287 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007248 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027178 | ||||||||
| Expr1162834 | |||||||||
| Expr2010226 | |||||||||
| Expr2028468 | |||||||||
| Drives_construct | WBCnstr00029432 | ||||||||
| Construct_product | WBCnstr00029432 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | I | Position | 7.15876 | Error | 0.040681 | |||
| Positive | Positive_clone | ZK39 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
