WormBase Tree Display for Gene: WBGene00014037
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| WBGene00014037 | SMap | S_parent | Sequence | ZK643 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK643.6 | |||||||
| Molecular_name | ZK643.6 | ||||||||
| ZK643.6.1 | |||||||||
| CE43086 | |||||||||
| Other_name | CELE_ZK643.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ZK643.6 | ||||||||
| DB_info | Database | AceView | gene | 3K50 | |||||
| WormQTL | gene | WBGene00014037 | |||||||
| WormFlux | gene | WBGene00014037 | |||||||
| NDB | locus_tag | CELE_ZK643.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00014037|UniProtKB=P30652 | |||||||
| family | PTHR46219 | ||||||||
| NCBI | gene | 191375 | |||||||
| RefSeq | protein | NM_066580.4 | |||||||
| SwissProt | UniProtAcc | P30652 | |||||||
| TREEFAM | TREEFAM_ID | TF316060 | |||||||
| UniProt_GCRP | UniProtAcc | P30652 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00029064 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00055234 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00162397 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00207851 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00218292 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00107500 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| chrIII_pilon.g8512 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00080640 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Paralog (60) | |||||||||
| Structured_description | Concise_description | ZK643.6 encodes a predicted secreted protein; the product of ZK643.6 contains NC6 (SXC) motifs, 36-amino acid cysteine-rich motifs that exhibit similarity to cnidarian toxins and that are found in many nematode proteins including the secreted TES-26 and TES-120 proteins of the parasitic ascarid nematode Toxocara canis (canine roundworm). | Paper_evidence | WBPaper00012240 | |||||
| WBPaper00038241 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Apr 2011 00:00:00 | ||||||||
| Automated_description | Enriched in ABalapapapa; ABalapppapa; ABarpaaa; ABplpaaappa; and ABprpaaappa based on single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-18; and hpl-2 based on tiling array; microarray; and RNA-seq studies. Is affected by five chemicals including methylmercuric chloride; multi-walled carbon nanotube; and Atrazine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK643.6 | |||||||
| Corresponding_CDS_history | ZK643.6:wp59 | ||||||||
| ZK643.6:wp195 | |||||||||
| Corresponding_transcript | ZK643.6.1 | ||||||||
| Other_sequence | Dviv_isotig12857 | ||||||||
| Dviv_isotig12856 | |||||||||
| Dviv_isotig12855 | |||||||||
| Associated_feature | WBsf993529 | ||||||||
| WBsf993530 | |||||||||
| WBsf993531 | |||||||||
| WBsf993532 | |||||||||
| WBsf993533 | |||||||||
| WBsf1015522 | |||||||||
| WBsf1015523 | |||||||||
| WBsf1015524 | |||||||||
| WBsf1015525 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022523 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005508 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059606 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019632 | ||||||||
| Expr1163015 | |||||||||
| Expr2008910 | |||||||||
| Expr2027145 | |||||||||
| Drives_construct | WBCnstr00029362 | ||||||||
| Construct_product | WBCnstr00029362 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (46) | |||||||||
| Interaction (73) | |||||||||
| Map_info | Positive | Positive_clone | ZK643 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 0.0514893 | |||||||
| Reference | WBPaper00012240 | ||||||||
| WBPaper00014803 | |||||||||
| WBPaper00038241 | |||||||||
| Method | Gene |
