WormBase Tree Display for Gene: WBGene00014193
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WBGene00014193 | SMap | S_parent | Sequence | ZK1037 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-247 | Person_evidence | WBPerson600 | |||||
Sequence_name | ZK1037.5 | ||||||||
Molecular_name | ZK1037.5 | ||||||||
ZK1037.5.1 | |||||||||
CE16757 | |||||||||
Other_name | CELE_ZK1037.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-247 | ||||||||
DB_info | Database | AceView | gene | 5P805 | |||||
WormQTL | gene | WBGene00014193 | |||||||
WormFlux | gene | WBGene00014193 | |||||||
NDB | locus_tag | CELE_ZK1037.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00014193|UniProtKB=O45987 | |||||||
family | PTHR46587 | ||||||||
NCBI | gene | 191500 | |||||||
RefSeq | protein | NM_074397.2 | |||||||
TREEFAM | TREEFAM_ID | TF317146 | |||||||
TrEMBL | UniProtAcc | O45987 | |||||||
UniProt_GCRP | UniProtAcc | O45987 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-247 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (128) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00035806 | ||||||||
00035807 | |||||||||
00035808 | |||||||||
00120905 | |||||||||
00120906 | |||||||||
00120907 | |||||||||
00120908 | |||||||||
Ortholog (44) | |||||||||
Paralog (218) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in obesity and type 2 diabetes mellitus. Is an ortholog of human NR1H2 (nuclear receptor subfamily 1 group H member 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7965) | ||||
DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7965) | ||||||
Molecular_info | Corresponding_CDS | ZK1037.5 | |||||||
Corresponding_transcript | ZK1037.5.1 | ||||||||
Associated_feature | WBsf978469 | ||||||||
WBsf1002263 | |||||||||
Transcription_factor | WBTranscriptionFactor000760 | ||||||||
Experimental_info | RNAi_result | WBRNAi00059053 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111774 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009447 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018854 | ||||||||
Expr1162486 | |||||||||
Expr2014143 | |||||||||
Expr2032384 | |||||||||
Drives_construct | WBCnstr00029238 | ||||||||
Construct_product | WBCnstr00029238 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (73) | |||||||||
Interaction (22) | |||||||||
Map_info | Map | V | Position | 7.7878 | Error | 0.020112 | |||
Positive | Positive_clone | ZK1037 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5319 | |||||||
5413 | |||||||||
4966 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00053737 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |