WormBase Tree Display for Gene: WBGene00014907
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| WBGene00014907 | SMap | S_parent | Sequence | Y51A2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-117 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y51A2A.9 | ||||||||
| Molecular_name | Y51A2A.9 | ||||||||
| Other_name | CELE_Y51A2A.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-117 | ||||||||
| DB_info | Database | AceView | gene | 5S793 | |||||
| WormQTL | gene | WBGene00014907 | |||||||
| NDB | locus_tag | CELE_Y51A2A.9 | |||||||
| NCBI | gene | 13218158 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 27 May 2004 15:23:24 | WBPerson1971 | Event | Imported | Initial conversion from Pseudogene class of WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-117 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00010934 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Alovudine; paraquat; and Chlorpyrifos based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | Y51A2A.9:wp122 | |||||||
| Corresponding_pseudogene | Y51A2A.9 | ||||||||
| Experimental_info | Microarray_results | SMD_Y51A2A.9 | |||||||
| 183667_at | |||||||||
| A_12_P106898 | |||||||||
| A_12_P137321 | |||||||||
| Aff_Y51A2A.9 | |||||||||
| GPL19516_CGZ0047685 | |||||||||
| GPL21109_Y51A2A.9 | |||||||||
| GPL3518_CE20279 | |||||||||
| GPL9450_Y51A2A.9 | |||||||||
| cea2.d.08115 | |||||||||
| Expression_cluster (64) | |||||||||
| Map_info | Map | V | Position | 15.7054 | Error | 0.08472 | |||
| Positive | Positive_clone | Y51A2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
