WormBase Tree Display for Gene: WBGene00015046
expand all nodes | collapse all nodes | view schema
| WBGene00015046 | SMap | S_parent | Sequence | B0213 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nlp-34 | Person_evidence | WBPerson242 | |||||
| Sequence_name | B0213.17 | ||||||||
| Molecular_name | B0213.17 | ||||||||
| B0213.17.1 | |||||||||
| CE30583 | |||||||||
| Other_name | CELE_B0213.17 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nlp-34 | ||||||||
| DB_info | Database | AceView | gene | 5E456 | |||||
| WormQTL | gene | WBGene00015046 | |||||||
| WormFlux | gene | WBGene00015046 | |||||||
| NDB | locus_tag | CELE_B0213.17 | |||||||
| NCBI | gene | 259618 | |||||||
| RefSeq | protein | NM_001383293.2 | |||||||
| TrEMBL | UniProtAcc | Q8MNX6 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MNX6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Nov 2004 10:37:27 | WBPerson2970 | Name_change | CGC_name | nlp-34 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084377 | ||||||||
| Ortholog | WBGene00024536 | Caenorhabditis briggsae | Person_evidence | WBPerson168 | |||||
| WBPerson2531 | |||||||||
| From_analysis | Inparanoid_8 | ||||||||
| WormBase-Compara | |||||||||
| WBGene00024539 | Caenorhabditis briggsae | Person_evidence | WBPerson168 | ||||||
| WBPerson2531 | |||||||||
| From_analysis | WormBase-Compara | ||||||||
| WBGene00045437 | Caenorhabditis remanei | Person_evidence | WBPerson168 | ||||||
| WBPerson2531 | |||||||||
| From_analysis | OMA | ||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00045469 | Caenorhabditis briggsae | Person_evidence | WBPerson168 | ||||||
| WBPerson2531 | |||||||||
| From_analysis | WormBase-Compara | ||||||||
| WBGene00144821 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00024618 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| FL83_02712 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| Pan_g13530 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
| WBGene00255890 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in neuropeptide signaling pathway. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0213.17 | |||||||
| Corresponding_transcript | B0213.17.1 | ||||||||
| Associated_feature | WBsf655557 | ||||||||
| WBsf668852 | |||||||||
| WBsf999716 | |||||||||
| WBsf1019448 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038734 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1025121 | ||||||||
| Expr1142945 | |||||||||
| Expr2014299 | |||||||||
| Expr2032540 | |||||||||
| Drives_construct | WBCnstr00000499 | ||||||||
| WBCnstr00029131 | |||||||||
| Construct_product | WBCnstr00000499 | ||||||||
| WBCnstr00029131 | |||||||||
| Microarray_results | A_12_P115167 | ||||||||
| GPL14144_B0213.17_123-182_0.511_1_A | |||||||||
| GPL19516_CGZ0000367 | |||||||||
| GPL21109_B0213.17 | |||||||||
| GPL8304_CE_WBGene00015046_A | |||||||||
| GPL8673_B0213_17P00022 | |||||||||
| GPL8673_B0213_17P00028 | |||||||||
| GPL8673_B0213_17P00033 | |||||||||
| GPL9450_B0213.17 | |||||||||
| cea2.d.00017 | |||||||||
| Expression_cluster (250) | |||||||||
| Interaction | WBInteraction000518454 | ||||||||
| WBInteraction000543093 | |||||||||
| WBInteraction000543094 | |||||||||
| WBInteraction000543095 | |||||||||
| Map_info | Map | V | Position | -7.34575 | |||||
| Positive | Positive_clone | B0213 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026655 | ||||||||
| WBPaper00032031 | |||||||||
| WBPaper00037416 | |||||||||
| WBPaper00043467 | |||||||||
| WBPaper00060703 | |||||||||
| WBPaper00061421 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-7.34885) | |||||||||
| Method | Gene |
