WormBase Tree Display for Gene: WBGene00015150
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| WBGene00015150 | SMap | S_parent | Sequence | B0336 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0336.13 | |||||||
| Molecular_name | B0336.13 | ||||||||
| B0336.13.1 | |||||||||
| CE26429 | |||||||||
| Other_name | CELE_B0336.13 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | B0336.13 | ||||||||
| DB_info | Database | AceView | gene | 3G783 | |||||
| WormQTL | gene | WBGene00015150 | |||||||
| WormFlux | gene | WBGene00015150 | |||||||
| NDB | locus_tag | CELE_B0336.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015150|UniProtKB=Q9BIB4 | |||||||
| family | PTHR10966 | ||||||||
| NCBI | gene | 175791 | |||||||
| RefSeq | protein | NM_001392105.1 | |||||||
| SwissProt | UniProtAcc | Q9BIB4 | |||||||
| TREEFAM | TREEFAM_ID | TF315131 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BIB4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500260 | ||||||||
| WBVar00829162 | |||||||||
| WBVar00829163 | |||||||||
| WBVar00829164 | |||||||||
| WBVar00829165 | |||||||||
| WBVar00829166 | |||||||||
| WBVar01500122 | |||||||||
| WBVar01500123 | |||||||||
| WBVar01566431 | |||||||||
| WBVar00398470 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00091459 | ||||||||
| 00091460 | |||||||||
| 00091461 | |||||||||
| 00091462 | |||||||||
| 00091463 | |||||||||
| 00091464 | |||||||||
| 00121128 | |||||||||
| 00121129 | |||||||||
| Contained_in_operon | CEOP3320 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00013736 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II general transcription initiation factor activity and TBP-class protein binding activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIIA complex. Is an ortholog of human GTF2A2 (general transcription factor IIA subunit 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0336.13 | |||||||
| Corresponding_transcript | B0336.13.1 | ||||||||
| Other_sequence | HCC04995_1 | ||||||||
| CBC05799_1 | |||||||||
| Tcol_isotig20800 | |||||||||
| JI181952.1 | |||||||||
| HC02101 | |||||||||
| Associated_feature | WBsf645198 | ||||||||
| WBsf658982 | |||||||||
| WBsf224980 | |||||||||
| WBsf224981 | |||||||||
| Transcription_factor | WBTranscriptionFactor000244 | ||||||||
| WBTranscriptionFactor000273 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038943 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038942 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085074 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005873 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009714 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007904 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016487 | ||||||||
| Expr1036483 | |||||||||
| Expr1143123 | |||||||||
| Expr2000147 | |||||||||
| Expr2018365 | |||||||||
| Drives_construct | WBCnstr00029048 | ||||||||
| Construct_product | WBCnstr00029048 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | B0336 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.45352 | |||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
