WormBase Tree Display for Gene: WBGene00015193
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| WBGene00015193 | SMap | S_parent | Sequence | B0432 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-117 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | B0432.12 | ||||||||
| Molecular_name | B0432.12 | ||||||||
| B0432.12.1 | |||||||||
| CE07750 | |||||||||
| Other_name | CELE_B0432.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-117 | ||||||||
| DB_info | Database | AceView | gene | 2A586 | |||||
| WormQTL | gene | WBGene00015193 | |||||||
| WormFlux | gene | WBGene00015193 | |||||||
| NDB | locus_tag | CELE_B0432.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015193|UniProtKB=P90996 | |||||||
| family | PTHR47753 | ||||||||
| NCBI | gene | 173417 | |||||||
| RefSeq | protein | NM_061297.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | P90996 | |||||||
| UniProt_GCRP | UniProtAcc | P90996 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-117 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (36) | |||||||||
| Paralog (80) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell and in male based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; RNA-seq; and tiling array studies. Is affected by seventeen chemicals including Ethanol; methylmercury hydroxide; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0432.12 | |||||||
| Corresponding_transcript | B0432.12.1 | ||||||||
| Associated_feature | WBsf222584 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00039054 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028143 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008308 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001317 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013305 | ||||||||
| Expr1143216 | |||||||||
| Drives_construct | WBCnstr00029015 | ||||||||
| Construct_product | WBCnstr00029015 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction (41) | |||||||||
| Map_info | Map | II | Position | -15.6408 | Error | 0.002269 | |||
| Positive | Positive_clone | B0432 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
