WormBase Tree Display for Gene: WBGene00015268
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| WBGene00015268 | SMap | S_parent | Sequence | BE0003N10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | fbxo-11.2 | Person_evidence | WBPerson171 | |||||
| Sequence_name | BE0003N10.3 | ||||||||
| Molecular_name | BE0003N10.3a | ||||||||
| BE0003N10.3a.1 | |||||||||
| CE50179 | |||||||||
| BE0003N10.3b | |||||||||
| CE50245 | |||||||||
| BE0003N10.3b.1 | |||||||||
| Other_name | CELE_BE0003N10.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxo-11.2 | ||||||||
| DB_info | Database | AceView | gene | 3C136 | |||||
| WormQTL | gene | WBGene00015268 | |||||||
| WormFlux | gene | WBGene00015268 | |||||||
| NDB | locus_tag | CELE_BE0003N10.3 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00015268|UniProtKB=A0A0K3AX46 | |||||||
| family | PTHR22990 | ||||||||
| NCBI | gene | 182047 | |||||||
| RefSeq | protein | NM_001393274.1 | |||||||
| NM_001381723.1 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3ARS9 | |||||||
| A0A0K3AX46 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AX46 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2014 16:42:19 | WBPerson1983 | Event | Split_into | WBGene00255598 | ||||
| 3 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | fbxo-11.2 | ||||
| Split_into | WBGene00255598 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxo | ||||||||
| Allele (290) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000860 | ||||||||
| 00001589 | |||||||||
| 00001590 | |||||||||
| 00121193 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00001089 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable zinc ion binding activity. Predicted to be involved in regulation of apoptotic process and ubiquitin-dependent protein catabolic process. Human ortholog(s) of this gene implicated in breast carcinoma; gastrointestinal system cancer (multiple); and lung non-small cell carcinoma. Is an ortholog of human FBXO11 (F-box protein 11). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13590) | ||||
| DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13590) | ||||||
| DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13590) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13590) | ||||||
| Molecular_info | Corresponding_CDS | BE0003N10.3a | |||||||
| BE0003N10.3b | |||||||||
| Corresponding_CDS_history | BE0003N10.3:wp150 | ||||||||
| BE0003N10.3:wp245 | |||||||||
| Corresponding_transcript | BE0003N10.3a.1 | ||||||||
| BE0003N10.3b.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf666445 | ||||||||
| WBsf666555 | |||||||||
| WBsf991217 | |||||||||
| WBsf1014173 | |||||||||
| WBsf226175 | |||||||||
| WBsf226176 | |||||||||
| WBsf226177 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039219 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1023803 | ||||||||
| Expr1036541 | |||||||||
| Expr1143362 | |||||||||
| Expr2000255 | |||||||||
| Expr2018475 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction | WBInteraction000353124 | ||||||||
| WBInteraction000381150 | |||||||||
| WBInteraction000384585 | |||||||||
| WBInteraction000541277 | |||||||||
| WBInteraction000573804 | |||||||||
| WBInteraction000574380 | |||||||||
| Map_info | Map | III | Position | -24.7807 | |||||
| Positive | Positive_clone | BE0003N10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
