WormBase Tree Display for Gene: WBGene00015296
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| WBGene00015296 | SMap | S_parent | Sequence | C01F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gtf-2F1 | |||||||
| Sequence_name | C01F1.1 | ||||||||
| Molecular_name | C01F1.1 | ||||||||
| C01F1.1.1 | |||||||||
| CE06742 | |||||||||
| Other_name | CELE_C01F1.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gtf-2F1 | ||||||||
| DB_info | Database | AceView | gene | 2E595 | |||||
| WormQTL | gene | WBGene00015296 | |||||||
| WormFlux | gene | WBGene00015296 | |||||||
| NDB | locus_tag | CELE_C01F1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015296|UniProtKB=Q17558 | |||||||
| family | PTHR13011 | ||||||||
| NCBI | gene | 173764 | |||||||
| RefSeq | protein | NM_062355.6 | |||||||
| TREEFAM | TREEFAM_ID | TF313850 | |||||||
| TrEMBL | UniProtAcc | Q17558 | |||||||
| UniProt_GCRP | UniProtAcc | Q17558 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Jul 2018 12:31:10 | WBPerson1983 | Name_change | CGC_name | gtf-2F1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gtf | ||||||||
| Allele (98) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP2120 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II general transcription initiation factor activity and TFIIF-class transcription factor complex binding activity. Predicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIIF complex. Is an ortholog of human GTF2F1 (general transcription factor IIF subunit 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01F1.1 | |||||||
| Corresponding_transcript | C01F1.1.1 | ||||||||
| Other_sequence (73) | |||||||||
| Associated_feature | WBsf221104 | ||||||||
| WBsf221105 | |||||||||
| WBsf221106 | |||||||||
| Transcription_factor | WBTranscriptionFactor000690 | ||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr1026093 | ||||||||
| Expr1036550 | |||||||||
| Expr1143416 | |||||||||
| Expr2000280 | |||||||||
| Expr2018502 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (91) | |||||||||
| Interaction (154) | |||||||||
| Map_info | Map | II | Position | -4.92626 | |||||
| Positive | Positive_clone | C01F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
