WormBase Tree Display for Gene: WBGene00015309
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| WBGene00015309 | SMap | S_parent | Sequence | C01G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C01G5.7 | |||||||
| Molecular_name | C01G5.7a | ||||||||
| C01G5.7a.1 | |||||||||
| CE34648 | |||||||||
| C01G5.7b | |||||||||
| CE49312 | |||||||||
| C01G5.7b.1 | |||||||||
| Other_name | CELE_C01G5.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C01G5.7 | ||||||||
| DB_info | Database | AceView | gene | 4H281 | |||||
| WormQTL | gene | WBGene00015309 | |||||||
| WormFlux | gene | WBGene00015309 | |||||||
| NDB | locus_tag | CELE_C01G5.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015309|UniProtKB=V6CIV2 | |||||||
| family | PTHR21502 | ||||||||
| NCBI | gene | 182075 | |||||||
| RefSeq | protein | NM_001306776.3 | |||||||
| NM_068589.2 | |||||||||
| TrEMBL | UniProtAcc | Q17570 | |||||||
| V6CIV2 | |||||||||
| UniProt_GCRP | UniProtAcc | V6CIV2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00027880 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00084997 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CSP26.g19198 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP40.g4108 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cni-C01G5.7 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00242.g7794 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| GCK72_013711 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_40170500 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g10634 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00277875 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapapapa; ABalapppapa; ADE; amphid neurons; and male distal tip cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by Doxycycline; Chlorpyrifos; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01G5.7a | |||||||
| C01G5.7b | |||||||||
| Corresponding_CDS_history | C01G5.7:wp104 | ||||||||
| Corresponding_transcript | C01G5.7a.1 | ||||||||
| C01G5.7b.1 | |||||||||
| Other_sequence | MC00068 | ||||||||
| JI482676.1 | |||||||||
| MC01834 | |||||||||
| ES743162.1 | |||||||||
| MH04918 | |||||||||
| JI474136.1 | |||||||||
| EX009053.1 | |||||||||
| MCC03845_1 | |||||||||
| MJ05044 | |||||||||
| Associated_feature | WBsf718109 | ||||||||
| WBsf996762 | |||||||||
| WBsf1017535 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039347 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039349 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028299 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022958 | ||||||||
| Expr1143465 | |||||||||
| Expr2000307 | |||||||||
| Expr2018531 | |||||||||
| Drives_construct | WBCnstr00028946 | ||||||||
| Construct_product | WBCnstr00028946 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (60) | |||||||||
| Interaction | WBInteraction000228938 | ||||||||
| Map_info | Positive | Positive_clone | C01G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.20323 | |||||||
| Method | Gene |
