WormBase Tree Display for Gene: WBGene00015359
expand all nodes | collapse all nodes | view schema
| WBGene00015359 | SMap | S_parent | Sequence | C02G6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C02G6.1 | ||||||||
| Molecular_name | C02G6.1 | |||||||||
| Other_name | CELE_C02G6.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | C02G6.1 | |||||||||
| DB_info | Database | AceView | gene | 5G357 | ||||||
| WormQTL | gene | WBGene00015359 | ||||||||
| SignaLink | protein | WBGene00015359 | ||||||||
| WormFlux | gene | WBGene00015359 | ||||||||
| NDB | locus_tag | CELE_C02G6.1 | ||||||||
| NCBI | gene | 182127 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Sep 2017 13:54:30 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (60) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00030925 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00155264 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00127059 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00058877 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog | WBGene00013492 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| WBGene00016185 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| WBGene00018426 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| WBGene00015360 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| Structured_description | Automated_description | Enriched in AFD; OLL; PVD; dopaminergic neurons; and hypodermis based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by ten chemicals including aldicarb; methylmercuric chloride; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C02G6.1:wp261 | ||||||||
| Corresponding_pseudogene | C02G6.1 | |||||||||
| Other_sequence | JI469898.1 | |||||||||
| CBC14039_1 | ||||||||||
| Tcol_isotig09682 | ||||||||||
| Tcol_isotig09681 | ||||||||||
| Associated_feature | WBsf231809 | |||||||||
| Experimental_info | Expr_pattern | Expr1012753 | ||||||||
| Expr1143570 | ||||||||||
| Expr2000343 | ||||||||||
| Expr2018567 | ||||||||||
| Drives_construct | WBCnstr00028904 | |||||||||
| Construct_product | WBCnstr00028904 | |||||||||
| Microarray_results (20) | ||||||||||
| Expression_cluster (97) | ||||||||||
| Interaction (38) | ||||||||||
| Map_info | Positive | Positive_clone | C02G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -0.791623 | ||||||||
| Reference | WBPaper00038491 | |||||||||
| WBPaper00055090 | ||||||||||
| Method | Gene |
