WormBase Tree Display for Gene: WBGene00015362
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WBGene00015362 | SMap | S_parent | Sequence | C02H6 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (26) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00029221 | ||||||
Ortholog | WBGene00023954 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
WBGene00033413 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||
WBGene00035626 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||
WBGene00037960 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||
WBGene00041155 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||
WBGene00041890 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||
WBGene00065812 | Caenorhabditis remanei | From_analysis | OMA | ||||
WBGene00122765 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||
chrV_pilon.g14687 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (218) | |||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C02H6.2 | |||||
Corresponding_transcript | C02H6.2.1 | ||||||
Associated_feature | WBsf652774 | ||||||
WBsf1000459 | |||||||
WBsf1019911 | |||||||
WBsf233945 | |||||||
Experimental_info | RNAi_result | WBRNAi00028366 | Inferred_automatically | RNAi_primary | |||
WBRNAi00039464 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095223 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010020 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028925 | ||||||
Expr1143574 | |||||||
Expr2011452 | |||||||
Expr2029690 | |||||||
Drives_construct | WBCnstr00028902 | ||||||
Construct_product | WBCnstr00028902 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (197) | |||||||
Interaction | WBInteraction000253519 | ||||||
Map_info | Map | V | Position | 0.748211 | Error | 0.000154 | |
Positive | Positive_clone | C02H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
WBPaper00028789 | |||||||
WBPaper00062289 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |