WormBase Tree Display for Gene: WBGene00015423
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| WBGene00015423 | SMap | S_parent | Sequence | C04E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C04E6.7 | |||||||
| Molecular_name | C04E6.7 | ||||||||
| C04E6.7.1 | |||||||||
| CE07912 | |||||||||
| Other_name | CELE_C04E6.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C04E6.7 | ||||||||
| DB_info | Database | AceView | gene | 5G375 | |||||
| WormQTL | gene | WBGene00015423 | |||||||
| WormFlux | gene | WBGene00015423 | |||||||
| NDB | locus_tag | CELE_C04E6.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015423|UniProtKB=O01464 | |||||||
| family | PTHR48083 | ||||||||
| NCBI | gene | 178976 | |||||||
| RefSeq | protein | NM_001383311.2 | |||||||
| TrEMBL | UniProtAcc | O01464 | |||||||
| UniProt_GCRP | UniProtAcc | O01464 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00008610 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009512 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010481 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018465 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplppppap; coelomocyte; intestine; neurons; and ventral nerve cord based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: HAD-like superfamily; Phosphoglycolate phosphatase-like, domain 2; HAD superfamily; haloacid dehalogenase-like hydrolase; Predicted HAD-superfamily phosphatase, subfamily IA/Epoxide hydrolase, N-terminal; and HAD hydrolase, subfamily IA. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C04E6.7 | |||||||
| Corresponding_transcript | C04E6.7.1 | ||||||||
| Other_sequence | SS00628 | ||||||||
| SSC00489_1 | |||||||||
| Associated_feature | WBsf1000114 | ||||||||
| WBsf1000115 | |||||||||
| WBsf1000116 | |||||||||
| WBsf1000117 | |||||||||
| WBsf1019703 | |||||||||
| WBsf231810 | |||||||||
| WBsf231811 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010124 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039612 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018678 | ||||||||
| Expr1143712 | |||||||||
| Expr2000402 | |||||||||
| Expr2018627 | |||||||||
| Drives_construct | WBCnstr00028858 | ||||||||
| Construct_product | WBCnstr00028858 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | C04E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -0.789714 | |||||||
| Reference | WBPaper00066161 | ||||||||
| Method | Gene |
