WormBase Tree Display for Gene: WBGene00015461
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| WBGene00015461 | SMap | S_parent | Sequence | C05C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | krr-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C05C8.2 | ||||||||
| Molecular_name | C05C8.2 | ||||||||
| C05C8.2.1 | |||||||||
| CE07920 | |||||||||
| Other_name | CELE_C05C8.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | krr-1 | ||||||||
| DB_info | Database | AceView | gene | 5H713 | |||||
| WormQTL | gene | WBGene00015461 | |||||||
| WormFlux | gene | WBGene00015461 | |||||||
| NDB | locus_tag | CELE_C05C8.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015461|UniProtKB=O16311 | |||||||
| family | PTHR12581 | ||||||||
| NCBI | gene | 179115 | |||||||
| RefSeq | protein | NM_072436.8 | |||||||
| TREEFAM | TREEFAM_ID | TF105745 | |||||||
| TrEMBL | UniProtAcc | O16311 | |||||||
| UniProt_GCRP | UniProtAcc | O16311 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Nov 2017 15:54:28 | WBPerson1983 | Name_change | CGC_name | krr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | krr | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00001537 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027788 | ||||||||
| 00027789 | |||||||||
| 00027790 | |||||||||
| 00027791 | |||||||||
| 00027792 | |||||||||
| 00027793 | |||||||||
| 00027794 | |||||||||
| 00027795 | |||||||||
| 00027796 | |||||||||
| 00121360 | |||||||||
| Ortholog (40) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Expressed in head and tail. Is an ortholog of human KRR1 (KRR1 small subunit processome component homolog). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C05C8.2 | |||||||
| Corresponding_transcript | C05C8.2.1 | ||||||||
| Other_sequence (57) | |||||||||
| Associated_feature | WBsf646929 | ||||||||
| WBsf1000453 | |||||||||
| WBsf1019907 | |||||||||
| WBsf231959 | |||||||||
| WBsf231960 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00024468 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008340 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039706 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008190 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5162 | ||||||||
| Expr1012457 | |||||||||
| Expr1036607 | |||||||||
| Expr1143806 | |||||||||
| Expr2000452 | |||||||||
| Expr2018675 | |||||||||
| Drives_construct | WBCnstr00002386 | ||||||||
| WBCnstr00028830 | |||||||||
| Construct_product | WBCnstr00028830 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (266) | |||||||||
| Map_info | Positive | Positive_clone | C05C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.640474 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041328 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
