WormBase Tree Display for Gene: WBGene00015576
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| WBGene00015576 | SMap | S_parent | Sequence | C07G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | C07G3.8 | |||||||
| Molecular_name | C07G3.8a | ||||||||
| C07G3.8a.1 | |||||||||
| CE51346 | |||||||||
| C07G3.8b | |||||||||
| CE51270 | |||||||||
| C07G3.8b.1 | |||||||||
| Other_name | CELE_C07G3.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C07G3.8 | ||||||||
| DB_info | Database | AceView | gene | 5D970 | |||||
| WormQTL | gene | WBGene00015576 | |||||||
| WormFlux | gene | WBGene00015576 | |||||||
| NDB | locus_tag | CELE_C07G3.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015576|UniProtKB=O16321 | |||||||
| family | PTHR31897 | ||||||||
| NCBI | gene | 182381 | |||||||
| RefSeq | protein | NM_001322525.1 | |||||||
| NM_001269096.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF315866 | |||||||
| TrEMBL | UniProtAcc | G4RU38 | |||||||
| O16321 | |||||||||
| UniProt_GCRP | UniProtAcc | O16321 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Feb 2016 15:17:31 | WBPerson4025 | Event | Split_into | WBGene00269378 | ||||
| Split_into | WBGene00269378 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (46) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell and arcade cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and rrf-3 based on tiling array; microarray; and RNA-seq studies. Is affected by Tunicamycin; Alovudine; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF19 and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C07G3.8a | |||||||
| C07G3.8b | |||||||||
| Corresponding_CDS_history | C07G3.8:wp146 | ||||||||
| C07G3.8:wp210 | |||||||||
| C07G3.8a:wp252 | |||||||||
| C07G3.8b:wp252 | |||||||||
| Corresponding_transcript | C07G3.8a.1 | ||||||||
| C07G3.8b.1 | |||||||||
| Associated_feature | WBsf233496 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00040025 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1013825 | ||||||||
| Expr1144104 | |||||||||
| Expr2000584 | |||||||||
| Expr2018810 | |||||||||
| Drives_construct | WBCnstr00028739 | ||||||||
| Construct_product | WBCnstr00028739 | ||||||||
| Microarray_results | 183885_at | ||||||||
| Aff_C07G3.8 | |||||||||
| GPL8673_C07G3_8P00403 | |||||||||
| Expression_cluster (43) | |||||||||
| Interaction | WBInteraction000110419 | ||||||||
| WBInteraction000192743 | |||||||||
| WBInteraction000228369 | |||||||||
| WBInteraction000237735 | |||||||||
| WBInteraction000257243 | |||||||||
| WBInteraction000260221 | |||||||||
| WBInteraction000280978 | |||||||||
| WBInteraction000281189 | |||||||||
| WBInteraction000298400 | |||||||||
| WBInteraction000443507 | |||||||||
| Map_info | Positive | Positive_clone | C07G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -10.7827 | |||||||
| Method | Gene |
