WormBase Tree Display for Gene: WBGene00015700
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| WBGene00015700 | SMap | S_parent | Sequence | C11D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | asp-9 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C11D2.2 | ||||||||
| Molecular_name | C11D2.2 | ||||||||
| C11D2.2.1 | |||||||||
| CE44638 | |||||||||
| Other_name | CELE_C11D2.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | asp-9 | ||||||||
| DB_info | Database | AceView | gene | 4G953 | |||||
| WormQTL | gene | WBGene00015700 | |||||||
| WormFlux | gene | WBGene00015700 | |||||||
| NDB | locus_tag | CELE_C11D2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015700|UniProtKB=O45072 | |||||||
| family | PTHR47966 | ||||||||
| NCBI | gene | 182511 | |||||||
| RefSeq | protein | NM_068527.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315800 | |||||||
| TrEMBL | UniProtAcc | O45072 | |||||||
| UniProt_GCRP | UniProtAcc | O45072 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asp | ||||||||
| Allele (35) | |||||||||
| Strain | WBStrain00032078 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033814 | ||||||||
| 00033815 | |||||||||
| 00033816 | |||||||||
| 00033817 | |||||||||
| 00033818 | |||||||||
| 00033819 | |||||||||
| 00033820 | |||||||||
| 00121500 | |||||||||
| 00121501 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Expressed in XXXL and XXXR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C11D2.2 | |||||||
| Corresponding_CDS_history | C11D2.2:wp212 | ||||||||
| Corresponding_transcript | C11D2.2.1 | ||||||||
| Other_sequence (52) | |||||||||
| Associated_feature | WBsf996710 | ||||||||
| WBsf996711 | |||||||||
| WBsf1017494 | |||||||||
| WBsf228374 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010614 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115181 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076111 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040341 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15913 | ||||||||
| Expr1012959 | |||||||||
| Expr1144410 | |||||||||
| Expr2009473 | |||||||||
| Expr2027710 | |||||||||
| Drives_construct | WBCnstr00028641 | ||||||||
| WBCnstr00042595 | |||||||||
| Construct_product | WBCnstr00028641 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction (58) | |||||||||
| Map_info | Map | IV | Position | 3.08939 | |||||
| Positive | Positive_clone | C11D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029046 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
