WormBase Tree Display for Gene: WBGene00015742
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| WBGene00015742 | SMap | S_parent | Sequence | C13F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | kxd-1 | Person_evidence | WBPerson451 | |||||
| Sequence_name | C13F10.2 | ||||||||
| Molecular_name | C13F10.2 | ||||||||
| C13F10.2.1 | |||||||||
| CE08144 | |||||||||
| Other_name | CELE_C13F10.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | kxd-1 | ||||||||
| DB_info | Database | AceView | gene | 5H703 | |||||
| WormQTL | gene | WBGene00015742 | |||||||
| WormFlux | gene | WBGene00015742 | |||||||
| NDB | locus_tag | CELE_C13F10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015742|UniProtKB=O01488 | |||||||
| family | PTHR13511 | ||||||||
| NCBI | gene | 182578 | |||||||
| RefSeq | protein | NM_072430.4 | |||||||
| TREEFAM | TREEFAM_ID | TF319035 | |||||||
| TrEMBL | UniProtAcc | O01488 | |||||||
| UniProt_GCRP | UniProtAcc | O01488 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Sep 2015 11:19:37 | WBPerson2970 | Name_change | CGC_name | kxd-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | kxd | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024754 | ||||||||
| 00024755 | |||||||||
| 00024756 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in lysosome localization. Predicted to be part of BORC complex. Is an ortholog of human KXD1 (KxDL motif containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C13F10.2 | |||||||
| Corresponding_transcript | C13F10.2.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf646926 | ||||||||
| WBsf1000451 | |||||||||
| WBsf231952 | |||||||||
| WBsf231953 | |||||||||
| WBsf231954 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028848 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010695 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040447 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062120 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111885 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13495 | ||||||||
| Expr1017499 | |||||||||
| Expr1036734 | |||||||||
| Expr1144514 | |||||||||
| Expr2012989 | |||||||||
| Expr2031221 | |||||||||
| Drives_construct | WBCnstr00028604 | ||||||||
| Construct_product | WBCnstr00028604 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (52) | |||||||||
| Map_info | Map | V | Position | 0.635099 | |||||
| Positive | Positive_clone | C13F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00052655 | |||||||||
| WBPaper00052935 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064980 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
