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WormBase Tree Display for Gene: WBGene00015819

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Name Class

WBGene00015819SMapS_parentSequenceC16A11
IdentityVersion3
NameCGC_namefbxc-44Person_evidenceWBPerson655
Sequence_nameC16A11.6
Molecular_nameC16A11.6
C16A11.6.1
CE40739
Other_nameCELE_C16A11.6Accession_evidenceNDBBX284602
Public_namefbxc-44
DB_infoDatabaseAceViewgene2E526
WormQTLgeneWBGene00015819
WormFluxgeneWBGene00015819
NDBlocus_tagCELE_C16A11.6
PanthergeneCAEEL|WormBase=WBGene00015819|UniProtKB=A3KFE6
familyPTHR31379
NCBIgene173757
RefSeqproteinNM_062345.5
TREEFAMTREEFAM_IDTF322125
TrEMBLUniProtAccA3KFE6
UniProt_GCRPUniProtAccA3KFE6
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Feb 2007 15:40:24WBPerson1867EventSplit_intoWBGene00045297
317 Jun 2008 14:44:53WBPerson2970Name_changeCGC_namefbxc-44
Split_intoWBGene00045297
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxc
Allele (30)
StrainWBStrain00037981
RNASeq_FPKM (74)
OrthologchrII_pilon.g4205Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (33)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ADE sheath cell; AFD; RIC; germ line; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by ten chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Protein of unknown function DUF3557.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC16A11.6
Corresponding_CDS_historyC16A11.6:wp124
C16A11.6:wp172
Corresponding_transcriptC16A11.6.1
Associated_featureWBsf222907
Experimental_info (7)
Map_infoMapIIPosition-5.08599Error0.032232
PositivePositive_cloneC16A11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene