WormBase Tree Display for Gene: WBGene00015902
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| WBGene00015902 | SMap | S_parent | Sequence | C17E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-159 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C17E7.7 | ||||||||
| Molecular_name | C17E7.7a | ||||||||
| C17E7.7a.1 | |||||||||
| CE46871 | |||||||||
| C17E7.7b | |||||||||
| CE51579 | |||||||||
| C17E7.7b.1 | |||||||||
| Other_name | CELE_C17E7.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-159 | ||||||||
| DB_info | Database | AceView | gene | 5E348 | |||||
| WormQTL | gene | WBGene00015902 | |||||||
| WormFlux | gene | WBGene00015902 | |||||||
| NDB | locus_tag | CELE_C17E7.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015902|UniProtKB=O16390 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 182732 | |||||||
| RefSeq | protein | NM_001330817.3 | |||||||
| NM_071668.5 | |||||||||
| TrEMBL | UniProtAcc | O16390 | |||||||
| A0A168H3P3 | |||||||||
| UniProt_GCRP | UniProtAcc | O16390 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-159 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (168) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002330 | ||||||||
| 00002331 | |||||||||
| 00002332 | |||||||||
| 00121635 | |||||||||
| 00121636 | |||||||||
| 00121637 | |||||||||
| 00121638 | |||||||||
| Ortholog (23) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17E7.7a | |||||||
| C17E7.7b | |||||||||
| Corresponding_CDS_history | C17E7.7:wp229 | ||||||||
| Corresponding_transcript | C17E7.7a.1 | ||||||||
| C17E7.7b.1 | |||||||||
| Associated_feature | WBsf233536 | ||||||||
| Transcription_factor | WBTranscriptionFactor000804 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00040814 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010915 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107144 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010196 | ||||||||
| Expr1144855 | |||||||||
| Expr2014059 | |||||||||
| Expr2032299 | |||||||||
| Drives_construct | WBCnstr00028469 | ||||||||
| Construct_product | WBCnstr00028469 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (47) | |||||||||
| Interaction | WBInteraction000197514 | ||||||||
| WBInteraction000331516 | |||||||||
| WBInteraction000352320 | |||||||||
| WBInteraction000355979 | |||||||||
| WBInteraction000363801 | |||||||||
| WBInteraction000408348 | |||||||||
| WBInteraction000433932 | |||||||||
| WBInteraction000437065 | |||||||||
| WBInteraction000460776 | |||||||||
| WBInteraction000535065 | |||||||||
| Map_info | Map | V | Position | -7.64274 | Error | 0.01046 | |||
| Positive | Positive_clone | C17E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
