WormBase Tree Display for Gene: WBGene00015943
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| WBGene00015943 | SMap | S_parent | Sequence | C18A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tiar-1 | Person_evidence | WBPerson1352 | |||||
| Sequence_name | C18A3.5 | ||||||||
| Molecular_name | C18A3.5a | ||||||||
| C18A3.5a.1 | |||||||||
| CE27708 | |||||||||
| C18A3.5b | |||||||||
| CE27709 | |||||||||
| C18A3.5c | |||||||||
| CE27710 | |||||||||
| C18A3.5b.1 | |||||||||
| C18A3.5c.1 | |||||||||
| Other_name | CELE_C18A3.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | tiar-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Aug 2010 10:05:58 | WBPerson2970 | Name_change | CGC_name | tiar-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tiar | ||||||||
| Allele (39) | |||||||||
| Strain | WBStrain00002273 | ||||||||
| WBStrain00001558 | |||||||||
| WBStrain00005716 | |||||||||
| WBStrain00005719 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (44) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Involved in several processes, including determination of adult lifespan; nematode larval development; and response to UV. Located in P granule; cytoplasmic stress granule; and nucleus. Expressed in several structures, including germ line; hypodermis; mechanosensory neurons; somatic cell; and tail. Is an ortholog of human TIA1 (TIA1 cytotoxic granule associated RNA binding protein) and TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081380 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11802) | ||||
| EFO:MONDO:0018949 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11802) | ||||||
| Molecular_info | Corresponding_CDS | C18A3.5a | |||||||
| C18A3.5b | |||||||||
| C18A3.5c | |||||||||
| Corresponding_CDS_history | C18A3.5d:wp88 | ||||||||
| C18A3.5e:wp275 | |||||||||
| C18A3.5f:wp275 | |||||||||
| Corresponding_transcript | C18A3.5a.1 | ||||||||
| C18A3.5b.1 | |||||||||
| C18A3.5c.1 | |||||||||
| Other_sequence (127) | |||||||||
| Associated_feature | WBsf650084 | ||||||||
| WBsf650085 | |||||||||
| WBsf665551 | |||||||||
| WBsf665552 | |||||||||
| WBsf223086 | |||||||||
| WBsf223087 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern (15) | |||||||||
| Drives_construct | WBCnstr00002398 | ||||||||
| WBCnstr00004330 | |||||||||
| WBCnstr00009614 | |||||||||
| WBCnstr00009615 | |||||||||
| WBCnstr00018197 | |||||||||
| WBCnstr00019821 | |||||||||
| WBCnstr00019822 | |||||||||
| WBCnstr00022507 | |||||||||
| WBCnstr00028437 | |||||||||
| Construct_product | WBCnstr00018197 | ||||||||
| WBCnstr00019821 | |||||||||
| WBCnstr00022506 | |||||||||
| WBCnstr00022507 | |||||||||
| WBCnstr00028437 | |||||||||
| Antibody | WBAntibody00002448 | ||||||||
| Microarray_results (46) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Map | II | Position | -0.964172 | Error | 0.002386 | |||
| Positive | Positive_clone | C18A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
