WormBase Tree Display for Gene: WBGene00015943
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WBGene00015943 | SMap | S_parent | Sequence | C18A3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tiar-1 | Person_evidence | WBPerson1352 | |||
Sequence_name | C18A3.5 | ||||||
Molecular_name | C18A3.5a | ||||||
C18A3.5a.1 | |||||||
CE27708 | |||||||
C18A3.5b | |||||||
CE27709 | |||||||
C18A3.5c | |||||||
CE27710 | |||||||
C18A3.5b.1 | |||||||
C18A3.5c.1 | |||||||
Other_name | CELE_C18A3.5 | Accession_evidence | NDB | BX284602 | |||
Public_name | tiar-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tiar | ||||||
Allele (39) | |||||||
Strain | WBStrain00002273 | ||||||
WBStrain00001558 | |||||||
WBStrain00005716 | |||||||
WBStrain00005719 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (26) | |||||||
Ortholog (44) | |||||||
Paralog (14) | |||||||
Structured_description | Automated_description | Predicted to enable mRNA binding activity. Involved in several processes, including determination of adult lifespan; nematode larval development; and response to UV. Located in P granule; cytoplasmic stress granule; and nucleus. Expressed in several structures, including germ line; hypodermis; mechanosensory neurons; somatic cell; and tail. Is an ortholog of human TIA1 (TIA1 cytotoxic granule associated RNA binding protein) and TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0081380 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11802) | ||
EFO:MONDO:0018949 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11802) | ||||
Molecular_info | Corresponding_CDS | C18A3.5a | |||||
C18A3.5b | |||||||
C18A3.5c | |||||||
Corresponding_CDS_history | C18A3.5d:wp88 | ||||||
C18A3.5e:wp275 | |||||||
C18A3.5f:wp275 | |||||||
Corresponding_transcript | C18A3.5a.1 | ||||||
C18A3.5b.1 | |||||||
C18A3.5c.1 | |||||||
Other_sequence (127) | |||||||
Associated_feature | WBsf650084 | ||||||
WBsf650085 | |||||||
WBsf665551 | |||||||
WBsf665552 | |||||||
WBsf223086 | |||||||
WBsf223087 | |||||||
Experimental_info | RNAi_result (18) | ||||||
Expr_pattern (15) | |||||||
Drives_construct | WBCnstr00002398 | ||||||
WBCnstr00004330 | |||||||
WBCnstr00009614 | |||||||
WBCnstr00009615 | |||||||
WBCnstr00018197 | |||||||
WBCnstr00019821 | |||||||
WBCnstr00019822 | |||||||
WBCnstr00022507 | |||||||
WBCnstr00028437 | |||||||
Construct_product | WBCnstr00018197 | ||||||
WBCnstr00019821 | |||||||
WBCnstr00022506 | |||||||
WBCnstr00022507 | |||||||
WBCnstr00028437 | |||||||
Antibody | WBAntibody00002448 | ||||||
Microarray_results (46) | |||||||
Expression_cluster (138) | |||||||
Interaction (47) | |||||||
Map_info | Map | II | Position | -0.964172 | Error | 0.002386 | |
Positive | Positive_clone | C18A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (15) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |