WormBase Tree Display for Gene: WBGene00016142

WBGene00016142 SMap: S_parent: Sequence: C26E6
  Identity: Version: 3
    Name: CGC_name: mrps-18C
      Sequence_name: C26E6.6
      Molecular_name: C26E6.6
        C26E6.6.1
        CE39477
      Other_name: mrpl-18C
        CELE_C26E6.6 Accession_evidence: NDB BX284603
      Public_name: mrps-18C
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:11 WBPerson2970 Name_change: CGC_name: mrps-18C
        3 07 Jun 2018 14:30:09 WBPerson1983 Name_change: CGC_name: mrpl-18
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrps
    Allele (11)
    RNASeq_FPKM (74)
    GO_annotation: 00047148
      00047149
      00047150
      00047151
      00047152
      00047153
      00121826
      00121827
      00121828
    Contained_in_operon: CEOP3244
    Ortholog (37)
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 9. Is an ortholog of human MRPL3 (mitochondrial ribosomal protein L3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111472 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10379)
  Molecular_info: Corresponding_CDS: C26E6.6
    Corresponding_CDS_history: C26E6.6:wp152
    Corresponding_transcript: C26E6.6.1
    Other_sequence (32)
    Associated_feature: WBsf224828
  Experimental_info: RNAi_result: WBRNAi00008441 Inferred_automatically: RNAi_primary
      WBRNAi00067675 Inferred_automatically: RNAi_primary
      WBRNAi00024641 Inferred_automatically: RNAi_primary
      WBRNAi00071273 Inferred_automatically: RNAi_primary
      WBRNAi00068769 Inferred_automatically: RNAi_primary
      WBRNAi00002446 Inferred_automatically: RNAi_primary
      WBRNAi00067907 Inferred_automatically: RNAi_primary
      WBRNAi00068770 Inferred_automatically: RNAi_primary
      WBRNAi00033358 Inferred_automatically: RNAi_primary
      WBRNAi00041274 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023855
      Expr1036903
      Expr1145315
      Expr2013742
      Expr2031977
    Drives_construct: WBCnstr00028297
    Construct_product: WBCnstr00028297
    Microarray_results (24)
    Expression_cluster (95)
    SAGE_tag: SAGE:attttcatca Strand: Antisense
      SAGE:gcttccgccagtcaaag Strand: Sense
        Unambiguously_mapped
      SAGE:ggctccatcactagaaa Strand: Sense
        Unambiguously_mapped
      SAGE:ggctccatca Strand: Sense
        Unambiguously_mapped
      SAGE:ttggcattgg Strand: Antisense
      SAGE:ttggcattgggccggat Strand: Antisense
      SAGE:gagctggggt Strand: Antisense
      SAGE:ttgtcagtat Strand: Sense
        Unambiguously_mapped
      SAGE:gaaataaaaa Strand: Antisense
      SAGE:ttgtcagtattacatca Strand: Sense
        Unambiguously_mapped
    Interaction (123)
  Map_info: Map: III Position: -2.33926 Error: 0.002445
    Positive: Positive_clone: C26E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040399
    WBPaper00049828
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene