WormBase Tree Display for Gene: WBGene00016375
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WBGene00016375 | SMap | S_parent | Sequence | C33H5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | rpap | |||||
Allele (12) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOP4252 | |||||
CEOP4663 | ||||||
Ortholog (33) | ||||||
Paralog | WBGene00000500 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
WBGene00006781 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00015916 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00019893 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00019983 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; intestine; muscle cell; and neurons based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including sir-2.1; set-2; and ain-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: RNA-polymerase II-associated protein 3-like, C-terminal domain; Tetratricopeptide repeat; Potential Monad-binding region of RPAP3; and Tetratricopeptide-like helical domain superfamily. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C33H5.8 | ||||
Corresponding_transcript | C33H5.8.1 | |||||
Other_sequence | CBC02458_1 | |||||
CRC12151_1 | ||||||
Associated_feature | WBsf668053 | |||||
WBsf230321 | ||||||
Experimental_info | RNAi_result | WBRNAi00061747 | Inferred_automatically | RNAi_primary | ||
WBRNAi00106373 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00029493 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00041820 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00011571 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1011221 | |||||
Expr1037010 | ||||||
Expr1145834 | ||||||
Expr2001364 | ||||||
Expr2019588 | ||||||
Drives_construct | WBCnstr00028121 | |||||
Construct_product | WBCnstr00028121 | |||||
Microarray_results (18) | ||||||
Expression_cluster (72) | ||||||
Interaction (13) | ||||||
Map_info | Positive | Positive_clone | C33H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 3.475 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00042465 | ||||||
WBPaper00055090 | ||||||
WBPaper00060878 | ||||||
Method | Gene |