WormBase Tree Display for Gene: WBGene00016484
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| WBGene00016484 | SMap | S_parent | Sequence | C36C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C36C5.15 | |||||||
| Molecular_name | C36C5.15 | ||||||||
| C36C5.15.1 | |||||||||
| CE08604 | |||||||||
| Other_name | CELE_C36C5.15 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C36C5.15 | ||||||||
| DB_info | Database | AceView | gene | 5D638 | |||||
| WormQTL | gene | WBGene00016484 | |||||||
| WormFlux | gene | WBGene00016484 | |||||||
| NDB | locus_tag | CELE_C36C5.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016484|UniProtKB=O16410 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 183271 | |||||||
| RefSeq | protein | NM_071472.1 | |||||||
| TREEFAM | TREEFAM_ID | TF318149 | |||||||
| TrEMBL | UniProtAcc | O16410 | |||||||
| UniProt_GCRP | UniProtAcc | O16410 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (90) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including cephalic sheath cell; coelomocyte; neurons; retrovesicular ganglion; and ventral nerve cord based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including npr-1; aak-2; and unc-30 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tunicamycin; glycine; and cholesterol based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Uncharacterised protein family UPF0376; Domain of unknown function DUF19; and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36C5.15 | |||||||
| Corresponding_transcript | C36C5.15.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042056 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029607 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020102 | ||||||||
| Expr1146054 | |||||||||
| Expr2001476 | |||||||||
| Drives_construct | WBCnstr00028030 | ||||||||
| Construct_product | WBCnstr00028030 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction | WBInteraction000192679 | ||||||||
| WBInteraction000253029 | |||||||||
| WBInteraction000286545 | |||||||||
| WBInteraction000314460 | |||||||||
| WBInteraction000421601 | |||||||||
| Map_info | Positive | Positive_clone | C36C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.7278 | |||||||
| Method | Gene |
