WormBase Tree Display for Gene: WBGene00016559
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| WBGene00016559 | SMap | S_parent | Sequence | C41A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C41A3.2 | |||||||
| Molecular_name | C41A3.2a | ||||||||
| C41A3.2a.1 | |||||||||
| CE47266 | |||||||||
| C41A3.2b | |||||||||
| CE39138 | |||||||||
| C41A3.2a.2 | |||||||||
| C41A3.2b.1 | |||||||||
| Other_name | CELE_C41A3.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C41A3.2 | ||||||||
| DB_info | Database | AceView | gene | XG26 | |||||
| WormQTL | gene | WBGene00016559 | |||||||
| WormFlux | gene | WBGene00016559 | |||||||
| NDB | locus_tag | CELE_C41A3.2 | |||||||
| NCBI | gene | 180814 | |||||||
| RefSeq | protein | NM_076520.5 | |||||||
| NM_001380969.1 | |||||||||
| TrEMBL | UniProtAcc | H2KYE7 | |||||||
| Q3HKB7 | |||||||||
| UniProt_GCRP | UniProtAcc | Q3HKB7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (137) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX064 | ||||||||
| Ortholog (14) | |||||||||
| Structured_description | Automated_description | Enriched in coelomocyte; germ line; head mesodermal cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C41A3.2a | |||||||
| C41A3.2b | |||||||||
| Corresponding_CDS_history | C41A3.2a:wp149 | ||||||||
| C41A3.2a:wp230 | |||||||||
| C41A3.2b:wp149 | |||||||||
| Corresponding_transcript | C41A3.2a.1 | ||||||||
| C41A3.2a.2 | |||||||||
| C41A3.2b.1 | |||||||||
| Associated_feature | WBsf653976 | ||||||||
| WBsf653977 | |||||||||
| WBsf670527 | |||||||||
| WBsf670528 | |||||||||
| WBsf1005261 | |||||||||
| WBsf1005262 | |||||||||
| WBsf1022950 | |||||||||
| WBsf237375 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001268 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042273 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011828 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010060 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029715 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020182 | ||||||||
| Expr1037099 | |||||||||
| Expr1146263 | |||||||||
| Expr2001560 | |||||||||
| Expr2019781 | |||||||||
| Drives_construct | WBCnstr00027976 | ||||||||
| Construct_product | WBCnstr00027976 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction | WBInteraction000236192 | ||||||||
| WBInteraction000547493 | |||||||||
| Map_info | Positive | Positive_clone | C41A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -5.35374 | |||||||
| Method | Gene |
