WormBase Tree Display for Gene: WBGene00016564
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| WBGene00016564 | SMap | S_parent | Sequence | C41D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cmt-1 | Paper_evidence | WBPaper00045992 | |||||
| Person_evidence | WBPerson1836 | ||||||||
| Sequence_name | C41D11.5 | ||||||||
| Molecular_name | C41D11.5 | ||||||||
| C41D11.5.1 | |||||||||
| CE27841 | |||||||||
| Other_name | CELE_C41D11.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cmt-1 | ||||||||
| DB_info | Database | AceView | gene | 1F18 | |||||
| WormQTL | gene | WBGene00016564 | |||||||
| WormFlux | gene | WBGene00016564 | |||||||
| NDB | locus_tag | CELE_C41D11.5 | |||||||
| NCBI | gene | 172046 | |||||||
| RefSeq | protein | NM_058972.4 | |||||||
| SwissProt | UniProtAcc | O01975 | |||||||
| UniProt_GCRP | UniProtAcc | O01975 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Nov 2014 15:10:23 | WBPerson2970 | Name_change | CGC_name | cmt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cmt | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00037134 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1180 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABalpapppa; ABalpppapa; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C41D11.5 | |||||||
| Corresponding_transcript | C41D11.5.1 | ||||||||
| Other_sequence | Tcir_isotig10886 | ||||||||
| CBC08595_1 | |||||||||
| Associated_feature | WBsf649098 | ||||||||
| WBsf219274 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007959 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003127 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042288 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015454 | ||||||||
| Expr1037103 | |||||||||
| Expr1146279 | |||||||||
| Expr2010259 | |||||||||
| Expr2028501 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (204) | |||||||||
| Map_info | Map | I | Position | -1.29781 | |||||
| Positive | Positive_clone | C41D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00048753 | ||||||||
| WBPaper00060003 | |||||||||
| WBPaper00060053 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
