WormBase Tree Display for Gene: WBGene00016598
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| WBGene00016598 | SMap | S_parent | Sequence | C42D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C42D4.13 | |||||||
| Molecular_name | C42D4.13a | ||||||||
| C42D4.13a.1 | |||||||||
| CE49388 | |||||||||
| C42D4.13b | |||||||||
| CE49129 | |||||||||
| C42D4.13b.1 | |||||||||
| Other_name | CELE_C42D4.13 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C42D4.13 | ||||||||
| DB_info | Database | AceView | gene | 4H952 | |||||
| WormQTL | gene | WBGene00016598 | |||||||
| WormFlux | gene | WBGene00016598 | |||||||
| NDB | locus_tag | CELE_C42D4.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016598|UniProtKB=V6CLE4 | |||||||
| family | PTHR23261 | ||||||||
| NCBI | gene | 183405 | |||||||
| RefSeq | protein | NM_001372863.1 | |||||||
| NM_001306780.1 | |||||||||
| TrEMBL | UniProtAcc | V6CLE4 | |||||||
| V6CLB0 | |||||||||
| UniProt_GCRP | UniProtAcc | V6CLE4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Enriched in NSM; germline precursor cell; hypodermis; and pharyngeal muscle cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-three chemicals including methylmercury hydroxide; 1-methylnicotinamide; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C42D4.13a | |||||||
| C42D4.13b | |||||||||
| Corresponding_CDS_history | C42D4.13:wp104 | ||||||||
| C42D4.13:wp240 | |||||||||
| Corresponding_transcript | C42D4.13a.1 | ||||||||
| C42D4.13b.1 | |||||||||
| Other_sequence | CSC02010_1 | ||||||||
| FD516269.1 | |||||||||
| Associated_feature | WBsf651893 | ||||||||
| WBsf230228 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029748 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042353 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011871 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014033 | ||||||||
| Expr1146339 | |||||||||
| Expr2001587 | |||||||||
| Expr2019811 | |||||||||
| Drives_construct | WBCnstr00027949 | ||||||||
| Construct_product | WBCnstr00027949 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (192) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | C42D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.29272 | |||||||
| Reference | WBPaper00035228 | ||||||||
| Method | Gene |
