WormBase Tree Display for Gene: WBGene00016687
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WBGene00016687 | SMap | S_parent | Sequence | C45H4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srbc-17 | Person_evidence | WBPerson522 | |||||
Sequence_name | C45H4.3 | ||||||||
Molecular_name | C45H4.3a | ||||||||
C45H4.3a.1 | |||||||||
CE38048 | |||||||||
C45H4.3b | |||||||||
CE51084 | |||||||||
C45H4.3b.1 | |||||||||
Other_name | CELE_C45H4.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | srbc-17 | ||||||||
DB_info | Database | AceView | gene | 5C653 | |||||
WormQTL | gene | WBGene00016687 | |||||||
WormFlux | gene | WBGene00016687 | |||||||
NDB | locus_tag | CELE_C45H4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016687|UniProtKB=Q5F4U4 | |||||||
family | PTHR10664 | ||||||||
NCBI | gene | 183485 | |||||||
RefSeq | protein | NM_071190.2 | |||||||
NM_001316792.1 | |||||||||
TrEMBL | UniProtAcc | A0A0M7RFF9 | |||||||
Q5F4U4 | |||||||||
UniProt_GCRP | UniProtAcc | Q5F4U4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Feb 2005 11:21:21 | WBPerson2970 | Name_change | CGC_name | srbc-17 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srbc | ||||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00001766 | ||||||||
Ortholog (33) | |||||||||
Paralog (123) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C45H4.3a | |||||||
C45H4.3b | |||||||||
Corresponding_CDS_history | C45H4.3:wp138 | ||||||||
Corresponding_transcript | C45H4.3a.1 | ||||||||
C45H4.3b.1 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012007 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1019615 | ||||||||
Expr1146553 | |||||||||
Drives_construct | WBCnstr00027886 | ||||||||
Construct_product | WBCnstr00027886 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (32) | |||||||||
SAGE_tag | SAGE:agaaaaaatg | Strand | Antisense | ||||||
SAGE:tgaaaactga | Strand | Antisense | |||||||
SAGE:ttttactaaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction | WBInteraction000438656 | ||||||||
Map_info | Map | V | Position | -15.6107 | Error | 0.00541 | |||
Positive | Positive_clone | C45H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |