WormBase Tree Display for Gene: WBGene00016740
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| WBGene00016740 | SMap | S_parent | Sequence | C48B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C48B6.2 | |||||||
| Molecular_name | C48B6.2 | ||||||||
| C48B6.2.1 | |||||||||
| CE08804 | |||||||||
| Other_name | CELE_C48B6.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C48B6.2 | ||||||||
| DB_info | Database | AceView | gene | 1H493 | |||||
| WormQTL | gene | WBGene00016740 | |||||||
| WormFlux | gene | WBGene00016740 | |||||||
| NDB | locus_tag | CELE_C48B6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016740|UniProtKB=O01513 | |||||||
| family | PTHR11831 | ||||||||
| NCBI | gene | 172420 | |||||||
| RefSeq | protein | NM_059571.8 | |||||||
| SwissProt | UniProtAcc | O01513 | |||||||
| TREEFAM | TREEFAM_ID | TF300149 | |||||||
| UniProt_GCRP | UniProtAcc | O01513 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00646629 | ||||||||
| WBVar00646630 | |||||||||
| WBVar00646631 | |||||||||
| WBVar00646632 | |||||||||
| WBVar00646633 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499054 | |||||||||
| WBVar02127731 | |||||||||
| WBVar00337173 | |||||||||
| WBVar01498959 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP1356 | ||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00004478 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing and ribosomal small subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of Mpp10 complex and small-subunit processome. Expressed in head neurons and pharyngeal muscle cell. Is an ortholog of human IMP3 (IMP U3 small nucleolar ribonucleoprotein 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48B6.2 | |||||||
| Corresponding_transcript | C48B6.2.1 | ||||||||
| Other_sequence (52) | |||||||||
| Associated_feature | WBsf217922 | ||||||||
| Experimental_info | RNAi_result (34) | ||||||||
| Expr_pattern | Expr2135 | ||||||||
| Expr1014023 | |||||||||
| Expr1037188 | |||||||||
| Expr1146712 | |||||||||
| Expr2001739 | |||||||||
| Expr2019967 | |||||||||
| Antibody | WBAntibody00001382 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction (207) | |||||||||
| Map_info | Positive | Positive_clone | C48B6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.50399 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
