WormBase Tree Display for Gene: WBGene00016752
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| WBGene00016752 | SMap | S_parent | Sequence | C48E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C48E7.7 | |||||||
| Molecular_name | C48E7.7 | ||||||||
| C48E7.7.1 | |||||||||
| CE08822 | |||||||||
| Other_name | CELE_C48E7.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C48E7.7 | ||||||||
| DB_info | Database | AceView | gene | 1G811 | |||||
| WormQTL | gene | WBGene00016752 | |||||||
| WormFlux | gene | WBGene00016752 | |||||||
| NDB | locus_tag | CELE_C48E7.7 | |||||||
| NCBI | gene | 172316 | |||||||
| RefSeq | protein | NM_001383221.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322497 | |||||||
| TrEMBL | UniProtAcc | Q8IG73 | |||||||
| UniProt_GCRP | UniProtAcc | Q8IG73 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499786 | ||||||||
| WBVar01499054 | |||||||||
| WBVar00335870 | |||||||||
| WBVar01498959 | |||||||||
| WBVar01500249 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00086164 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| chrI_pilon.g1107 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00194703 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020350 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including CEP socket cell; amphid sheath cell; germ line; intestine; and sperm based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including Ethanol; methylmercuric chloride; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48E7.7 | |||||||
| Corresponding_transcript | C48E7.7.1 | ||||||||
| Other_sequence | FG621275.1 | ||||||||
| Associated_feature | WBsf217773 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00003475 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029948 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008214 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012104 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052838 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066108 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042746 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004164 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020457 | ||||||||
| Expr1146736 | |||||||||
| Expr2001749 | |||||||||
| Expr2019977 | |||||||||
| Drives_construct | WBCnstr00027832 | ||||||||
| Construct_product | WBCnstr00027832 | ||||||||
| Microarray_results | SMD_C48E7.7 | ||||||||
| A_12_P132921 | |||||||||
| A_12_P170197 | |||||||||
| Aff_C48E7.7 | |||||||||
| GPL3518_CE08822 | |||||||||
| GPL8304_CE_WBGene00016752_B | |||||||||
| GPL8304_CE_WBGene00017815_B | |||||||||
| GPL9450_C48E7.7 | |||||||||
| cea2.d.17416 | |||||||||
| Expression_cluster (165) | |||||||||
| Interaction (229) | |||||||||
| Map_info | Positive | Positive_clone | C48E7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.88384 | |||||||
| Method | Gene |
