WormBase Tree Display for Gene: WBGene00016809
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| WBGene00016809 | SMap | S_parent | Sequence | C50D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C50D2.6 | |||||||
| Molecular_name | C50D2.6a | ||||||||
| C50D2.6a.1 | |||||||||
| CE34768 | |||||||||
| C50D2.6b | |||||||||
| CE50542 | |||||||||
| C50D2.6c | |||||||||
| CE50571 | |||||||||
| C50D2.6b.1 | |||||||||
| C50D2.6c.1 | |||||||||
| Other_name | CELE_C50D2.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C50D2.6 | ||||||||
| DB_info | Database | AceView | gene | 2A377 | |||||
| WormQTL | gene | WBGene00016809 | |||||||
| WormFlux | gene | WBGene00016809 | |||||||
| NDB | locus_tag | CELE_C50D2.6 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00016809|UniProtKB=Q8ITY7 | |||||||
| family | PTHR36944 | ||||||||
| NCBI | gene | 3565416 | |||||||
| RefSeq | protein | NM_001313596.1 | |||||||
| NM_061255.4 | |||||||||
| NM_001313595.4 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AQZ6 | |||||||
| A0A0K3ATX0 | |||||||||
| Q8ITY7 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8ITY7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00008233 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015167 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in body wall musculature; intestine; neurons; retrovesicular ganglion; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by seven chemicals including bisphenol S; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50D2.6a | |||||||
| C50D2.6b | |||||||||
| C50D2.6c | |||||||||
| Corresponding_CDS_history | C50D2.6:wp105 | ||||||||
| Corresponding_transcript | C50D2.6a.1 | ||||||||
| C50D2.6b.1 | |||||||||
| C50D2.6c.1 | |||||||||
| Other_sequence | Dviv_isotig25665 | ||||||||
| Acan_isotig13630 | |||||||||
| CK850445.1 | |||||||||
| WBC01855_1 | |||||||||
| AYC02603_1 | |||||||||
| AE03865 | |||||||||
| Oden_isotig22318 | |||||||||
| JI174378.1 | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012207 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007415 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042888 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030024 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017575 | ||||||||
| Expr1037216 | |||||||||
| Expr1146864 | |||||||||
| Expr2001813 | |||||||||
| Expr2020039 | |||||||||
| Drives_construct | WBCnstr00027788 | ||||||||
| Construct_product | WBCnstr00027788 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction | WBInteraction000311062 | ||||||||
| WBInteraction000410663 | |||||||||
| WBInteraction000432455 | |||||||||
| WBInteraction000440826 | |||||||||
| WBInteraction000445354 | |||||||||
| Map_info | Positive | Positive_clone | C50D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -16.2155 | |||||||
| Method | Gene |
