WormBase Tree Display for Gene: WBGene00016851
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| WBGene00016851 | SMap | S_parent | Sequence | C50H11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | srt-71 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | C50H11.3 | |||||||||
| Molecular_name | C50H11.3 | |||||||||
| Other_name | CELE_C50H11.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srt-71 | |||||||||
| DB_info | Database | AceView | gene | 5D555 | ||||||
| WormQTL | gene | WBGene00016851 | ||||||||
| WormFlux | gene | WBGene00016851 | ||||||||
| NDB | locus_tag | CELE_C50H11.3 | ||||||||
| NCBI | gene | 183693 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 02 Dec 2004 09:41:19 | WBPerson2970 | Name_change | CGC_name | srt-71 | |||||
| 3 | 02 Oct 2015 13:22:23 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srt | |||||||||
| Allele (79) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00056803 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| WBGene00147358 | Caenorhabditis brenneri | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| WBGene00162692 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Paralog (57) | ||||||||||
| Structured_description | Automated_description | Is affected by mir-34; eri-1; and let-60 based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C50H11.3:wp153 | ||||||||
| C50H11.3:wp250 | ||||||||||
| Corresponding_pseudogene | C50H11.3 | |||||||||
| Associated_feature | WBsf661171 | |||||||||
| Experimental_info | Expr_pattern | Expr1010609 | ||||||||
| Expr1146936 | ||||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (16) | ||||||||||
| Interaction | WBInteraction000278105 | |||||||||
| WBInteraction000307622 | ||||||||||
| WBInteraction000330921 | ||||||||||
| WBInteraction000334561 | ||||||||||
| WBInteraction000364266 | ||||||||||
| WBInteraction000408044 | ||||||||||
| WBInteraction000410231 | ||||||||||
| Map_info | Map | V | Position | -12.7744 | Error | 0.003631 | ||||
| Positive | Positive_clone | C50H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
