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WormBase Tree Display for Gene: WBGene00016882

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Name Class

WBGene00016882SMapS_parentSequenceC52E2
IdentityVersion1
NameSequence_nameC52E2.3
Molecular_nameC52E2.3
C52E2.3.1
CE25827
Other_nameC52E2.gCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_C52E2.3Accession_evidenceNDBBX284602
Public_nameC52E2.3
DB_infoDatabaseAceViewgene2C125
WormQTLgeneWBGene00016882
WormFluxgeneWBGene00016882
NDBlocus_tagCELE_C52E2.3
PanthergeneCAEEL|WormBase=WBGene00016882|UniProtKB=Q9N4K7
familyPTHR21453
NCBIgene183725
RefSeqproteinNM_001381338.1
TREEFAMTREEFAM_IDTF322011
TrEMBLUniProtAccQ9N4K7
UniProt_GCRPUniProtAccQ9N4K7
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (67)
RNASeq_FPKM (74)
Ortholog (11)
Paralog (88)
Structured_descriptionAutomated_descriptionIs affected by several genes including sir-2.1; osm-3; and mut-2 based on microarray and RNA-seq studies. Is affected by four chemicals including aldicarb; Rifampin; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: TRA-1 regulated and TRA-1 regulated protein R03H10.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC52E2.3
Corresponding_transcriptC52E2.3.1
Other_sequenceFG584546.1
GPC00355_1
GP00808
Associated_featureWBsf657365
WBsf986832
WBsf986833
Experimental_infoRNAi_resultWBRNAi00012320Inferred_automaticallyRNAi_primary
WBRNAi00030085Inferred_automaticallyRNAi_primary
WBRNAi00022517Inferred_automaticallyRNAi_primary
WBRNAi00030084Inferred_automaticallyRNAi_primary
WBRNAi00043039Inferred_automaticallyRNAi_primary
WBRNAi00012319Inferred_automaticallyRNAi_primary
Expr_patternExpr1016746
Expr1147000
Expr2001865
Expr2020091
Drives_constructWBCnstr00027729
Construct_productWBCnstr00027729
Microarray_results (21)
Expression_cluster (44)
Map_infoPositivePositive_cloneC52E2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-14.2984
MethodGene