WormBase Tree Display for Gene: WBGene00016882
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WBGene00016882 | SMap | S_parent | Sequence | C52E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C52E2.3 | |||||||
Molecular_name | C52E2.3 | ||||||||
C52E2.3.1 | |||||||||
CE25827 | |||||||||
Other_name | C52E2.g | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_C52E2.3 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | C52E2.3 | ||||||||
DB_info | Database | AceView | gene | 2C125 | |||||
WormQTL | gene | WBGene00016882 | |||||||
WormFlux | gene | WBGene00016882 | |||||||
NDB | locus_tag | CELE_C52E2.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016882|UniProtKB=Q9N4K7 | |||||||
family | PTHR21453 | ||||||||
NCBI | gene | 183725 | |||||||
RefSeq | protein | NM_001381338.1 | |||||||
TREEFAM | TREEFAM_ID | TF322011 | |||||||
TrEMBL | UniProtAcc | Q9N4K7 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4K7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (67) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (11) | |||||||||
Paralog (88) | |||||||||
Structured_description | Automated_description | Is affected by several genes including sir-2.1; osm-3; and mut-2 based on microarray and RNA-seq studies. Is affected by four chemicals including aldicarb; Rifampin; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: TRA-1 regulated and TRA-1 regulated protein R03H10.4. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C52E2.3 | |||||||
Corresponding_transcript | C52E2.3.1 | ||||||||
Other_sequence | FG584546.1 | ||||||||
GPC00355_1 | |||||||||
GP00808 | |||||||||
Associated_feature | WBsf657365 | ||||||||
WBsf986832 | |||||||||
WBsf986833 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012320 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030085 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022517 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030084 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043039 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012319 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016746 | ||||||||
Expr1147000 | |||||||||
Expr2001865 | |||||||||
Expr2020091 | |||||||||
Drives_construct | WBCnstr00027729 | ||||||||
Construct_product | WBCnstr00027729 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (44) | |||||||||
Map_info | Positive | Positive_clone | C52E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -14.2984 | |||||||
Method | Gene |