WormBase Tree Display for Gene: WBGene00016885
expand all nodes | collapse all nodes | view schema
| WBGene00016885 | SMap | S_parent | Sequence | C52E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-97 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C52E2.6 | ||||||||
| Molecular_name | C52E2.6 | ||||||||
| C52E2.6.1 | |||||||||
| CE47914 | |||||||||
| Other_name | C52E2.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_C52E2.6 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | fbxb-97 | ||||||||
| DB_info | Database | AceView | gene | 2C122 | |||||
| WormQTL | gene | WBGene00016885 | |||||||
| WormFlux | gene | WBGene00016885 | |||||||
| NDB | locus_tag | CELE_C52E2.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016885|UniProtKB=Q95Y48 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 183726 | |||||||
| RefSeq | protein | NM_061692.8 | |||||||
| TrEMBL | UniProtAcc | Q95Y48 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y48 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-97 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (105) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Automated_description | Enriched in hypodermis based on RNA-seq studies. Is affected by several genes including daf-2; pie-1; and pgl-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; methylmercuric chloride; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C52E2.6 | |||||||
| Corresponding_CDS_history | C52E2.6:wp90 | ||||||||
| C52E2.6:wp124 | |||||||||
| C52E2.6:wp228 | |||||||||
| C52E2.6:wp234 | |||||||||
| Corresponding_transcript | C52E2.6.1 | ||||||||
| Associated_feature | WBsf1011641 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012316 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043043 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011643 | ||||||||
| Expr1037245 | |||||||||
| Expr1147003 | |||||||||
| Expr2011696 | |||||||||
| Expr2029935 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction | WBInteraction000561136 | ||||||||
| Map_info | Map | II | Position | -14.3112 | Error | 0.003876 | |||
| Positive | Positive_clone | C52E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
