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WormBase Tree Display for Gene: WBGene00016993

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Name Class

WBGene00016993SMapS_parentSequenceCD4
IdentityVersion1
NameSequence_nameCD4.8
Molecular_nameCD4.8
CD4.8.1
CE53731
Other_nameCELE_CD4.8Accession_evidenceNDBBX284605
Public_nameCD4.8
DB_infoDatabaseAceViewgene5G80
WormQTLgeneWBGene00016993
WormFluxgeneWBGene00016993
NDBlocus_tagCELE_CD4.8
PanthergeneCAEEL|WormBase=WBGene00016993|UniProtKB=O61192
familyPTHR23362
NCBIgene178947
RefSeqproteinNM_001374911.2
TREEFAMTREEFAM_IDTF322256
TrEMBLUniProtAccO61192
UniProt_GCRPUniProtAccO61192
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (41)
RNASeq_FPKM (74)
Ortholog (12)
Paralog (37)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplppppaa; ABprppppaa; germ line; germline precursor cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including rotenone; manganese chloride; and bisphenol A based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCD4.8
Corresponding_CDS_historyCD4.8:wp176
CD4.8:wp217
CD4.8:wp273
Corresponding_transcriptCD4.8.1
Other_sequenceMIC04675_1
Associated_featureWBsf1000038
WBsf233703
Experimental_infoRNAi_resultWBRNAi00022001Inferred_automaticallyRNAi_primary
WBRNAi00012482Inferred_automaticallyRNAi_primary
WBRNAi00021999Inferred_automaticallyRNAi_primary
WBRNAi00043308Inferred_automaticallyRNAi_primary
WBRNAi00043309Inferred_automaticallyRNAi_primary
WBRNAi00082475Inferred_automaticallyRNAi_primary
WBRNAi00021998Inferred_automaticallyRNAi_primary
WBRNAi00082672Inferred_automaticallyRNAi_primary
WBRNAi00059409Inferred_automaticallyRNAi_primary
Expr_patternExpr1023606
Expr1037298
Expr1147288
Expr2001994
Expr2020218
Drives_constructWBCnstr00027649
Construct_productWBCnstr00027649
Microarray_results (14)
Expression_cluster (107)
InteractionWBInteraction000216581
Map_infoPositivePositive_cloneCD4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-1.34983
MethodGene