WormBase Tree Display for Gene: WBGene00017039
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WBGene00017039 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | trk-1 | Person_evidence | WBPerson4023 | |||
Sequence_name | D1073.1 | ||||||
Molecular_name | D1073.1 | ||||||
D1073.1.1 | |||||||
CE53483 | |||||||
Other_name | CELE_D1073.1 | Accession_evidence | NDB | BX284606 | |||
Public_name | trk-1 | ||||||
DB_info | Database | WormQTL | gene | WBGene00017039 | |||
WormFlux | gene | WBGene00017039 | |||||
NDB | locus_tag | CELE_D1073.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017039|UniProtKB=G4RZJ9 | |||||
family | PTHR24418 | ||||||
NCBI | gene | 183575 | |||||
RefSeq | protein | NM_001373402.5 | |||||
TrEMBL | UniProtAcc | A0A4V0IL59 | |||||
UniProt_GCRP | UniProtAcc | A0A4V0IL59 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | trk | ||||||
Allele (157) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog (27) | |||||||
Paralog (45) | |||||||
Structured_description | Concise_description | trk-1 encodes a receptor tyrosine kinase that is most closely related to the vertebrate neurotrophin receptors. | Paper_evidence | WBPaper00027258 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 11 Jun 2007 00:00:00 | ||||||
Automated_description | Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Predicted to be involved in cell differentiation; innate immune response; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D1073.1 | |||||
Corresponding_CDS_history | D1073.1:wp102 | ||||||
D1073.1:wp156 | |||||||
D1073.1:wp163 | |||||||
D1073.1a:wp271 | |||||||
D1073.1b:wp271 | |||||||
Corresponding_transcript | D1073.1.1 | ||||||
Other_sequence | ACC28704_1 | ||||||
EY459401.1 | |||||||
CRC11782_1 | |||||||
Oden_isotig19047 | |||||||
Associated_feature | WBsf1006286 | ||||||
WBsf1023487 | |||||||
WBsf1023488 | |||||||
WBsf237737 | |||||||
Experimental_info | RNAi_result | WBRNAi00012547 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043408 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043407 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012099 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028958 | ||||||
Expr1147393 | |||||||
Expr2017497 | |||||||
Expr2035636 | |||||||
Drives_construct | WBCnstr00027617 | ||||||
Construct_product | WBCnstr00027617 | ||||||
Microarray_results (26) | |||||||
Expression_cluster (122) | |||||||
Interaction (108) | |||||||
Map_info | Map | X | Position | 0.466501 | Error | 0.001647 | |
Positive | Positive_clone | D1073 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027258 | ||||||
WBPaper00038491 | |||||||
WBPaper00049490 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |