WormBase Tree Display for Gene: WBGene00017157
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| WBGene00017157 | SMap | S_parent | Sequence | F01E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tyra-2 | Person_evidence | WBPerson2227 | |||||
| WBPerson3043 | |||||||||
| Sequence_name | F01E11.5 | ||||||||
| Molecular_name | F01E11.5a | ||||||||
| F01E11.5a.1 | |||||||||
| CE38313 | |||||||||
| F01E11.5b | |||||||||
| CE35711 | |||||||||
| F01E11.5c | |||||||||
| CE30931 | |||||||||
| F01E11.5b.1 | |||||||||
| F01E11.5b.2 | |||||||||
| F01E11.5c.1 | |||||||||
| Other_name | CELE_F01E11.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tyra-2 | ||||||||
| DB_info | Database | AceView | gene | XH616 | |||||
| WormQTL | gene | WBGene00017157 | |||||||
| WormFlux | gene | WBGene00017157 | |||||||
| NDB | locus_tag | CELE_F01E11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017157|UniProtKB=Q19084 | |||||||
| family | PTHR24248 | ||||||||
| NCBI | gene | 180970 | |||||||
| RefSeq | protein | NM_001038448.5 | |||||||
| NM_001029351.6 | |||||||||
| NM_001029350.7 | |||||||||
| SwissProt | UniProtAcc | Q19084 | |||||||
| TREEFAM | TREEFAM_ID | TF351748 | |||||||
| UniProt_GCRP | UniProtAcc | Q19084 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Aug 2005 14:40:50 | WBPerson2970 | Name_change | CGC_name | tyra-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tyra | ||||||||
| Allele (128) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled amine receptor activity. Predicted to be involved in adenylate cyclase-activating adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F01E11.5a | |||||||
| F01E11.5b | |||||||||
| F01E11.5c | |||||||||
| Corresponding_CDS_history | F01E11.5a:wp141 | ||||||||
| F01E11.5b:wp109 | |||||||||
| Corresponding_transcript | F01E11.5a.1 | ||||||||
| F01E11.5b.1 | |||||||||
| F01E11.5b.2 | |||||||||
| F01E11.5c.1 | |||||||||
| Other_sequence | Oden_isotig28023 | ||||||||
| JI227792.1 | |||||||||
| CJC16133_1 | |||||||||
| Oden_isotig29509 | |||||||||
| Dviv_isotig25227 | |||||||||
| Acan_isotig12515 | |||||||||
| JI224343.1 | |||||||||
| JI221162.1 | |||||||||
| Associated_feature | WBsf654102 | ||||||||
| WBsf1005708 | |||||||||
| WBsf1005709 | |||||||||
| WBsf1023170 | |||||||||
| WBsf237539 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00072205 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000762 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030535 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012733 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043739 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2715 | ||||||||
| Expr3414 | |||||||||
| Expr3415 | |||||||||
| Expr12557 | |||||||||
| Expr14828 | |||||||||
| Expr14829 | |||||||||
| Expr1011682 | |||||||||
| Expr1147724 | |||||||||
| Expr2017691 | |||||||||
| Expr2035829 | |||||||||
| Drives_construct | WBCnstr00000008 | ||||||||
| WBCnstr00011388 | |||||||||
| WBCnstr00011389 | |||||||||
| WBCnstr00027525 | |||||||||
| WBCnstr00041551 | |||||||||
| Construct_product | WBCnstr00011389 | ||||||||
| WBCnstr00027525 | |||||||||
| WBCnstr00041551 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction | WBInteraction000428264 | ||||||||
| WBInteraction000455480 | |||||||||
| Map_info | Positive | Positive_clone | F01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Mapping_data | Multi_point | 5477 | |||||||
| 4441 | |||||||||
| Interpolated_map_position | X | -1.92724 | |||||||
| Pseudo_map_position | |||||||||
| Reference (28) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
