WormBase Tree Display for Gene: WBGene00017200
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| WBGene00017200 | SMap | S_parent | Sequence | F07C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F07C4.6 | |||||||
| Molecular_name | F07C4.6 | ||||||||
| F07C4.6.1 | |||||||||
| CE09205 | |||||||||
| Other_name | CELE_F07C4.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F07C4.6 | ||||||||
| DB_info | Database | AceView | gene | 5I107 | |||||
| WormQTL | gene | WBGene00017200 | |||||||
| WormFlux | gene | WBGene00017200 | |||||||
| NDB | locus_tag | CELE_F07C4.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017200|UniProtKB=P91208 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 184131 | |||||||
| RefSeq | protein | NM_072570.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | P91208 | |||||||
| UniProt_GCRP | UniProtAcc | P91208 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (71) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; antimycin; and sucrose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F07C4.6 | |||||||
| Corresponding_transcript | F07C4.6.1 | ||||||||
| Associated_feature | WBsf231997 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012818 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043893 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030603 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043894 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016105 | ||||||||
| Expr1147868 | |||||||||
| Drives_construct | WBCnstr00027487 | ||||||||
| Construct_product | WBCnstr00027487 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (93) | |||||||||
| SAGE_tag | SAGE:aattggcaga | Strand | Antisense | ||||||
| SAGE:cagcggaagataatttt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:cagcggaaga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000220779 | ||||||||
| WBInteraction000299795 | |||||||||
| WBInteraction000308454 | |||||||||
| WBInteraction000340692 | |||||||||
| WBInteraction000345479 | |||||||||
| WBInteraction000400836 | |||||||||
| WBInteraction000434362 | |||||||||
| WBInteraction000440750 | |||||||||
| WBInteraction000455690 | |||||||||
| Map_info | Positive | Positive_clone | F07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.82014 | |||||||
| Method | Gene |
