WormBase Tree Display for Gene: WBGene00017226
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| WBGene00017226 | SMap | S_parent | Sequence | F07G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-53 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F07G6.7 | ||||||||
| Molecular_name | F07G6.7 | ||||||||
| F07G6.7.1 | |||||||||
| CE39346 | |||||||||
| Other_name | CELE_F07G6.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | fbxa-53 | ||||||||
| DB_info | Database | AceView | gene | XC330 | |||||
| WormQTL | gene | WBGene00017226 | |||||||
| WormFlux | gene | WBGene00017226 | |||||||
| NDB | locus_tag | CELE_F07G6.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017226|UniProtKB=Q19169 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 184154 | |||||||
| RefSeq | protein | NM_075914.7 | |||||||
| TREEFAM | TREEFAM_ID | TF322360 | |||||||
| TrEMBL | UniProtAcc | Q19169 | |||||||
| UniProt_GCRP | UniProtAcc | Q19169 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-53 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F07G6.7 | |||||||
| Corresponding_CDS_history | F07G6.7:wp151 | ||||||||
| F07G6.7:wp192 | |||||||||
| Corresponding_transcript | F07G6.7.1 | ||||||||
| Associated_feature | WBsf653711 | ||||||||
| WBsf670123 | |||||||||
| WBsf237025 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012850 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043937 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016076 | ||||||||
| Expr1147911 | |||||||||
| Expr2011555 | |||||||||
| Expr2029793 | |||||||||
| Drives_construct | WBCnstr00027472 | ||||||||
| Construct_product | WBCnstr00027472 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000201053 | ||||||||
| WBInteraction000209181 | |||||||||
| WBInteraction000299646 | |||||||||
| WBInteraction000313121 | |||||||||
| WBInteraction000314392 | |||||||||
| WBInteraction000321638 | |||||||||
| WBInteraction000443389 | |||||||||
| WBInteraction000452209 | |||||||||
| Map_info | Map | X | Position | -17.6827 | |||||
| Positive | Positive_clone | F07G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
