WormBase Tree Display for Gene: WBGene00017290
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WBGene00017290 | SMap | S_parent | Sequence | F09E5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F09E5.12 | |||||||
Molecular_name | F09E5.12 | ||||||||
F09E5.12.1 | |||||||||
CE02607 | |||||||||
F09E5.12.2 | |||||||||
Other_name | F09E5.c | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_F09E5.12 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | F09E5.12 | ||||||||
DB_info | Database | AceView | gene | 2F656 | |||||
WormQTL | gene | WBGene00017290 | |||||||
WormFlux | gene | WBGene00017290 | |||||||
NDB | locus_tag | CELE_F09E5.12 | |||||||
NCBI | gene | 184243 | |||||||
RefSeq | protein | NM_062606.3 | |||||||
TrEMBL | UniProtAcc | Q19261 | |||||||
UniProt_GCRP | UniProtAcc | Q19261 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (50) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | CSP28.g16943 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | |||||
FL83_06035 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_006003 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g4473 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; pgl-1; and alg-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including multi-walled carbon nanotube; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F09E5.12 | |||||||
Corresponding_transcript | F09E5.12.1 | ||||||||
F09E5.12.2 | |||||||||
Other_sequence | FC539326.1 | ||||||||
EY461461.1 | |||||||||
FC554103.1 | |||||||||
EW742697.1 | |||||||||
FC539501.1 | |||||||||
FC543682.1 | |||||||||
CR11117 | |||||||||
EY458503.1 | |||||||||
EY469226.1 | |||||||||
Experimental_info | RNAi_result | WBRNAi00044123 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044124 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044125 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00110587 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012590 | ||||||||
Expr1037430 | |||||||||
Expr1148089 | |||||||||
Expr2002344 | |||||||||
Expr2020562 | |||||||||
Drives_construct | WBCnstr00027419 | ||||||||
Construct_product | WBCnstr00027419 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (72) | |||||||||
Interaction | WBInteraction000568368 | ||||||||
Map_info | Positive | Positive_clone | F09E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -1.7868 | |||||||
Method | Gene |