WormBase Tree Display for Gene: WBGene00017300
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| WBGene00017300 | SMap | S_parent | Sequence | F09F7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpc-2 | Person_evidence | WBPerson10054 | |||||
| Sequence_name | F09F7.3 | ||||||||
| Molecular_name | F09F7.3 | ||||||||
| F09F7.3.1 | |||||||||
| CE30653 | |||||||||
| Other_name | CELE_F09F7.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rpc-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2012 14:29:00 | WBPerson2970 | Name_change | CGC_name | rpc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpc | ||||||||
| Allele (93) | |||||||||
| Strain | WBStrain00037354 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP3308 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00008781 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016140 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable several functions, including DNA-directed 5'-3' RNA polymerase activity; metal ion binding activity; and ribonucleoside binding activity. Predicted to contribute to RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of RNA polymerase III complex. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease and hypomyelinating leukodystrophy 8. Is an ortholog of human POLR3B (RNA polymerase III subunit B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10595 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30348) | ||||
| DOID:0060797 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30348) | ||||||
| Molecular_info | Corresponding_CDS | F09F7.3 | |||||||
| Corresponding_transcript | F09F7.3.1 | ||||||||
| Other_sequence (41) | |||||||||
| Associated_feature | WBsf658957 | ||||||||
| WBsf658958 | |||||||||
| WBsf992440 | |||||||||
| WBsf992441 | |||||||||
| WBsf1014908 | |||||||||
| WBsf224950 | |||||||||
| WBsf224951 | |||||||||
| Experimental_info | RNAi_result (39) | ||||||||
| Expr_pattern | Expr1023913 | ||||||||
| Expr1037434 | |||||||||
| Expr1148122 | |||||||||
| Expr2015433 | |||||||||
| Expr2033668 | |||||||||
| Drives_construct | WBCnstr00027410 | ||||||||
| Construct_product | WBCnstr00027410 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (123) | |||||||||
| SAGE_tag (17) | |||||||||
| Interaction (293) | |||||||||
| Map_info | Map | III | Position | -1.54506 | |||||
| Positive | Positive_clone | F09F7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
