WormBase Tree Display for Gene: WBGene00017493
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| WBGene00017493 | SMap | S_parent | Sequence | F15E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-30 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F15E11.4 | ||||||||
| Molecular_name | F15E11.4 | ||||||||
| F15E11.4.1 | |||||||||
| CE17002 | |||||||||
| Other_name | F15E11.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F15E11.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | irld-30 | ||||||||
| DB_info | Database | AceView | gene | 5C816 | |||||
| WormQTL | gene | WBGene00017493 | |||||||
| WormFlux | gene | WBGene00017493 | |||||||
| NDB | locus_tag | CELE_F15E11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017493|UniProtKB=O44600 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 184539 | |||||||
| RefSeq | protein | NM_071244.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317243 | |||||||
| TrEMBL | UniProtAcc | O44600 | |||||||
| UniProt_GCRP | UniProtAcc | O44600 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-30 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (62) | |||||||||
| Paralog (75) | |||||||||
| Structured_description | Automated_description | Enriched in ADLL; ADLR; and neurons based on single-cell RNA-seq; RNA-seq; and microarray studies. Is affected by several genes including let-60; eat-2; and nhr-49 based on RNA-seq and microarray studies. Is affected by seven chemicals including Tunicamycin; stavudine; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F15E11.4 | |||||||
| Corresponding_transcript | F15E11.4.1 | ||||||||
| Associated_feature | WBsf233412 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00013375 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044737 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1148704 | ||||||||
| Expr2012841 | |||||||||
| Expr2031078 | |||||||||
| Drives_construct | WBCnstr00027255 | ||||||||
| Construct_product | WBCnstr00027255 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (44) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | V | Position | -14.8646 | |||||
| Positive | Positive_clone | F15E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005154 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
