WormBase Tree Display for Gene: WBGene00017605
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| WBGene00017605 | SMap | S_parent | Sequence | F19F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | snu-66 | Person_evidence | WBPerson713 | |||||
| Sequence_name | F19F10.9 | ||||||||
| Molecular_name | F19F10.9 | ||||||||
| F19F10.9.1 | |||||||||
| CE27372 | |||||||||
| Other_name | sart-1 | ||||||||
| CELE_F19F10.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | snu-66 | ||||||||
| DB_info | Database | AceView | gene | 5I52 | |||||
| WormQTL | gene | WBGene00017605 | |||||||
| WormFlux | gene | WBGene00017605 | |||||||
| NDB | locus_tag | CELE_F19F10.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017605|UniProtKB=O01524 | |||||||
| family | PTHR14152 | ||||||||
| NCBI | gene | 179140 | |||||||
| RefSeq | protein | NM_072551.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318828 | |||||||
| TrEMBL | UniProtAcc | O01524 | |||||||
| UniProt_GCRP | UniProtAcc | O01524 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Jan 2020 11:43:42 | WBPerson1983 | Name_change | CGC_name | sart-1 | ||||
| 3 | 19 Apr 2021 01:27:01 | WBPerson1983 | Name_change | CGC_name | snu-66 | ||||
| Other_name | sart-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | snu | ||||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024914 | ||||||||
| 00024915 | |||||||||
| 00024916 | |||||||||
| 00024917 | |||||||||
| 00024918 | |||||||||
| 00024919 | |||||||||
| 00024920 | |||||||||
| 00024921 | |||||||||
| 00122951 | |||||||||
| 00122952 | |||||||||
| Ortholog (40) | |||||||||
| Structured_description | Concise_description | The F19F10.9 gene encodes a homolog of the human SART1 gene, which encodes a protein recognised by IgE that may be involved in atopic disease. | Paper_evidence | WBPaper00012878 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in mRNA cis splicing, via spliceosome and maturation of 5S rRNA. Predicted to be located in nucleus. Predicted to be part of U4/U6 x U5 tri-snRNP complex. Is an ortholog of human SART1 (spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F19F10.9 | |||||||
| Corresponding_transcript | F19F10.9.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf652782 | ||||||||
| WBsf669126 | |||||||||
| WBsf233959 | |||||||||
| WBsf233960 | |||||||||
| Experimental_info | RNAi_result (29) | ||||||||
| Expr_pattern | Expr1024971 | ||||||||
| Expr1037562 | |||||||||
| Expr1148992 | |||||||||
| Expr2002754 | |||||||||
| Expr2020971 | |||||||||
| Drives_construct | WBCnstr00027167 | ||||||||
| Construct_product | WBCnstr00027167 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (51) | |||||||||
| Map_info | Positive | Positive_clone | F19F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.812568 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061738 | |||||||||
| WBPaper00064758 | |||||||||
| Method | Gene |
