WormBase Tree Display for Gene: WBGene00017749
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| WBGene00017749 | SMap | S_parent | Sequence | C23H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpoa-49 | Person_evidence | WBPerson10054 | |||||
| Sequence_name | F23F1.9 | ||||||||
| Molecular_name | F23F1.9 | ||||||||
| F23F1.9.1 | |||||||||
| CE27997 | |||||||||
| Other_name | CELE_F23F1.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rpoa-49 | ||||||||
| DB_info | Database | AceView | gene | 2A337 | |||||
| WormQTL | gene | WBGene00017749 | |||||||
| NDB | locus_tag | CELE_F23F1.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017749|UniProtKB=Q95X83 | |||||||
| family | PTHR14440 | ||||||||
| NCBI | gene | 24104475 | |||||||
| RefSeq | protein | NM_001306572.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317305 | |||||||
| TrEMBL | UniProtAcc | Q95X83 | |||||||
| UniProt_GCRP | UniProtAcc | Q95X83 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2012 14:29:00 | WBPerson2970 | Name_change | CGC_name | rpoa-49 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpoa | ||||||||
| Allele (41) | |||||||||
| Strain | WBStrain00049408 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088820 | ||||||||
| 00088821 | |||||||||
| 00088822 | |||||||||
| 00088823 | |||||||||
| 00088824 | |||||||||
| 00088825 | |||||||||
| 00123057 | |||||||||
| 00123058 | |||||||||
| Contained_in_operon | CEOP2004 | ||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in RNA polymerase I preinitiation complex assembly and transcription elongation by RNA polymerase I. Predicted to be located in nucleolus. Predicted to be part of RNA polymerase I complex. Is an ortholog of human POLR1E (RNA polymerase I subunit E). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F23F1.9 | |||||||
| Corresponding_transcript | F23F1.9.1 | ||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf220707 | ||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1017231 | ||||||||
| Expr1037619 | |||||||||
| Expr1149349 | |||||||||
| Expr2015501 | |||||||||
| Expr2033736 | |||||||||
| Drives_construct | WBCnstr00027052 | ||||||||
| Construct_product | WBCnstr00027052 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (91) | |||||||||
| Interaction | WBInteraction000552320 | ||||||||
| WBInteraction000552645 | |||||||||
| WBInteraction000575785 | |||||||||
| Map_info | Map | II | Position | -17.9537 | |||||
| Positive | Positive_clone | F23F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
