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WormBase Tree Display for Gene: WBGene00017754

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Name Class

WBGene00017754SMapS_parentSequenceF23F12
IdentityVersion3
NameCGC_namechtb-2Person_evidenceWBPerson1820
Sequence_nameF23F12.8
Molecular_nameF23F12.8
F23F12.8.1
CE38952
Other_nameCELE_F23F12.8Accession_evidenceNDBBX284603
Public_namechtb-2
DB_infoDatabaseAceViewgene3H575
WormQTLgeneWBGene00017754
WormFluxgeneWBGene00017754
NDBlocus_tagCELE_F23F12.8
PanthergeneCAEEL|WormBase=WBGene00017754|UniProtKB=P46504
familyPTHR12931
NCBIgene184907
RefSeqproteinNM_066026.3
SwissProtUniProtAccP46504
TREEFAMTREEFAM_IDTF351880
UniProt_GCRPUniProtAccP46504
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
225 Jul 2005 09:17:40WBPerson1867EventAcquires_mergeWBGene00017753
304 Jan 2022 10:41:14WBPerson1983Name_changeCGC_namechtb-2
Acquires_mergeWBGene00017753
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchtb
Allele (71)
StrainWBStrain00002145
RNASeq_FPKM (74)
Ortholog (22)
ParalogWBGene00007718Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionF23F12.8 encodes a large (980-residue) protein, predicted to besecreted, with two chitin-binding peritrophin-A domains, separated by alow-complexity region; F23F12.8 is synthesized in larval and adultpharynx, a known site of chitin deposition; like CEJ-1 and CPG-2 inembryos, F23F12.8 might participate in chitin synthesis, and itsperitrophin-A domains might enable mechanical cross-linking of chitin.Paper_evidenceWBPaper00004881
WBPaper00006525
WBPaper00026721
WBPaper00028588
WBPaper00029231
WBPaper00029232
Curator_confirmedWBPerson567
Date_last_updated09 Apr 2007 00:00:00
Automated_descriptionEnriched in several structures, including AFD; AVA; male distal tip cell; pharyngeal muscle cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and let-60 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Family of unknown function (DUF5401).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF23F12.8
Corresponding_CDS_historyF23F12.8:wp146
Corresponding_transcriptF23F12.8.1
Other_sequenceHGC10063_1
HG12132
Associated_featureWBsf992779
WBsf1015103
WBsf225119
Experimental_infoRNAi_resultWBRNAi00031332Inferred_automaticallyRNAi_primary
WBRNAi00005573Inferred_automaticallyRNAi_primary
WBRNAi00045437Inferred_automaticallyRNAi_primary
WBRNAi00013825Inferred_automaticallyRNAi_primary
WBRNAi00013826Inferred_automaticallyRNAi_primary
WBRNAi00005787Inferred_automaticallyRNAi_primary
WBRNAi00073042Inferred_automaticallyRNAi_primary
WBRNAi00045436Inferred_automaticallyRNAi_primary
WBRNAi00031331Inferred_automaticallyRNAi_primary
Expr_patternChronogram930
Expr5841
Expr1026149
Expr1037622
Expr1149356
Expr2002928
Expr2021145
Drives_constructWBCnstr00002904
WBCnstr00027048
Construct_productWBCnstr00027048
Microarray_results (30)
Expression_cluster (123)
Interaction (25)
Map_infoPositivePositive_cloneF23F12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.19078
ReferenceWBPaper00064648
MethodGene