WormBase Tree Display for Gene: WBGene00017754
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WBGene00017754 | SMap | S_parent | Sequence | F23F12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | chtb-2 | Person_evidence | WBPerson1820 | |||||
Sequence_name | F23F12.8 | ||||||||
Molecular_name | F23F12.8 | ||||||||
F23F12.8.1 | |||||||||
CE38952 | |||||||||
Other_name | CELE_F23F12.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | chtb-2 | ||||||||
DB_info | Database | AceView | gene | 3H575 | |||||
WormQTL | gene | WBGene00017754 | |||||||
WormFlux | gene | WBGene00017754 | |||||||
NDB | locus_tag | CELE_F23F12.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017754|UniProtKB=P46504 | |||||||
family | PTHR12931 | ||||||||
NCBI | gene | 184907 | |||||||
RefSeq | protein | NM_066026.3 | |||||||
SwissProt | UniProtAcc | P46504 | |||||||
TREEFAM | TREEFAM_ID | TF351880 | |||||||
UniProt_GCRP | UniProtAcc | P46504 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 25 Jul 2005 09:17:40 | WBPerson1867 | Event | Acquires_merge | WBGene00017753 | ||||
3 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | chtb-2 | ||||
Acquires_merge | WBGene00017753 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chtb | ||||||||
Allele (71) | |||||||||
Strain | WBStrain00002145 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00007718 | Caenorhabditis elegans | From_analysis | Panther | |||||
Structured_description | Concise_description | F23F12.8 encodes a large (980-residue) protein, predicted to besecreted, with two chitin-binding peritrophin-A domains, separated by alow-complexity region; F23F12.8 is synthesized in larval and adultpharynx, a known site of chitin deposition; like CEJ-1 and CPG-2 inembryos, F23F12.8 might participate in chitin synthesis, and itsperitrophin-A domains might enable mechanical cross-linking of chitin. | Paper_evidence | WBPaper00004881 | |||||
WBPaper00006525 | |||||||||
WBPaper00026721 | |||||||||
WBPaper00028588 | |||||||||
WBPaper00029231 | |||||||||
WBPaper00029232 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 09 Apr 2007 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including AFD; AVA; male distal tip cell; pharyngeal muscle cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and let-60 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Family of unknown function (DUF5401). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F23F12.8 | |||||||
Corresponding_CDS_history | F23F12.8:wp146 | ||||||||
Corresponding_transcript | F23F12.8.1 | ||||||||
Other_sequence | HGC10063_1 | ||||||||
HG12132 | |||||||||
Associated_feature | WBsf992779 | ||||||||
WBsf1015103 | |||||||||
WBsf225119 | |||||||||
Experimental_info | RNAi_result | WBRNAi00031332 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005573 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045437 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013825 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013826 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005787 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00073042 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045436 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031331 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram930 | ||||||||
Expr5841 | |||||||||
Expr1026149 | |||||||||
Expr1037622 | |||||||||
Expr1149356 | |||||||||
Expr2002928 | |||||||||
Expr2021145 | |||||||||
Drives_construct | WBCnstr00002904 | ||||||||
WBCnstr00027048 | |||||||||
Construct_product | WBCnstr00027048 | ||||||||
Microarray_results (30) | |||||||||
Expression_cluster (123) | |||||||||
Interaction (25) | |||||||||
Map_info | Positive | Positive_clone | F23F12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -1.19078 | |||||||
Reference | WBPaper00064648 | ||||||||
Method | Gene |