WormBase Tree Display for Gene: WBGene00017779
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| WBGene00017779 | SMap | S_parent | Sequence | F25E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gtr-1 | Paper_evidence | WBPaper00042213 | |||||
| Person_evidence | WBPerson8413 | ||||||||
| Sequence_name | F25E2.1 | ||||||||
| Molecular_name | F25E2.1 | ||||||||
| F25E2.1.1 | |||||||||
| CE07130 | |||||||||
| Other_name | CELE_F25E2.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gtr-1 | ||||||||
| DB_info | Database | AceView | gene | XB421 | |||||
| WormQTL | gene | WBGene00017779 | |||||||
| WormFlux | gene | WBGene00017779 | |||||||
| NDB | locus_tag | CELE_F25E2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017779|UniProtKB=Q19779 | |||||||
| family | PTHR24246 | ||||||||
| NCBI | gene | 180427 | |||||||
| RefSeq | protein | NM_075756.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319322 | |||||||
| TrEMBL | UniProtAcc | Q19779 | |||||||
| UniProt_GCRP | UniProtAcc | Q19779 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Apr 2013 09:53:02 | WBPerson2970 | Name_change | CGC_name | gtr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gtr | ||||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065845 | ||||||||
| 00065846 | |||||||||
| 00065847 | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Expressed in neurons and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25E2.1 | |||||||
| Corresponding_transcript | F25E2.1.1 | ||||||||
| Other_sequence | Acan_isotig10534 | ||||||||
| FC551478.1 | |||||||||
| Oden_isotig17261 | |||||||||
| ACC09129_1 | |||||||||
| Oden_isotig17262 | |||||||||
| FC550598.1 | |||||||||
| Associated_feature | WBsf1003868 | ||||||||
| WBsf1003869 | |||||||||
| WBsf1022173 | |||||||||
| WBsf1022174 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031367 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001920 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045495 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013865 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10802 | ||||||||
| Expr1026043 | |||||||||
| Expr1149414 | |||||||||
| Expr2012344 | |||||||||
| Expr2030581 | |||||||||
| Drives_construct | WBCnstr00017742 | ||||||||
| WBCnstr00027024 | |||||||||
| Construct_product | WBCnstr00027024 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction | WBInteraction000356540 | ||||||||
| WBInteraction000520021 | |||||||||
| WBInteraction000520022 | |||||||||
| Map_info | Map | X | Position | -19.5 | |||||
| Positive | Positive_clone | F25E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00018022 | ||||||||
| WBPaper00061107 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
